Job Description P60906 Confidence 99.85% Date Thu Jan 5 12:07:14 GMT 2012 Rank 50 Aligned Residues 158 % Identity 17% Template c2dq3A_ PDB info PDB header:ligase Chain: A: PDB Molecule:seryl-trna synthetase; PDBTitle: crystal structure of aq_298 Resolution 3.00 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	G	M	N	D	Y	L	P	G	E	T	A	I	W	Q	R	I	E	G	T	L	K	N	V	L	G	S	Y	G	Y	S	E	I	R	L	P	I	V	E	Q	T	P	L	F	K	R	A	I	G	E	V	T	D	V	V	E	K	E	M	Y	T	F	E	D	R	N	G	D	S	L	T	L	R	P	E	G	T	A	G	C
Query Conservation
Alig confidence																																																	.	.														.	.	.
Template Conservation																																																	.	.														.	.	.
Template Sequence		S	R	F	T	V	I	A	G	W	G	A	R	L	E	R	A	L	I	N	F	X	L	D	L	H	T	K	K	G	Y	K	E	I	C	P	P	H	L	V	K	P	E	I	L	I	G	T	.	.	G	Q	L	P	K	F	E	E	D	L	Y	K	C	.	.	.	E	R	D	N	L	Y	L	I	P	T	A	E	V	P	L
Template Known Secondary structure		S	S						T																				T	T								S											.	.	S		T	T	T	T	G	G	G	S		B		.	.	.	T	T	T						S	S	T
Template Predicted Secondary structure																																																	.	.														.	.	.
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.			.	210	.	.	.	.	.	.	.	.	.	220	.				.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
		89	90	.	.	.	.		.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.								.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.			.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure								.																						.	.	.	.	.	.	.																											.	.
Query SS confidence								.																						.	.	.	.	.	.	.																											.	.
Query Sequence		V	R	A	G	I	E	.	H	G	L	L	Y	N	Q	E	Q	R	L	W	Y	I	G	P	M	F	R	H	E	.	.	.	.	.	.	.	R	P	Q	K	G	R	Y	R	Q	F	H	Q	L	G	C	E	V	F	G	L	Q	G	P	D	I	D	.	.	A	E	L	I	M	L	T	A	R	W	W	R	A	L	G	I	S
Query Conservation								.																						.	.	.	.	.	.	.																											.	.
Alig confidence								.																						.	.	.	.	.	.	.																											.	.
Template Conservation
Template Sequence		T	N	L	Y	R	E	E	I	L	K	E	E	N	L	P	I	Y	L	T	A	Y	T	P	C	Y	R	R	E	A	G	A	Y	G	K	D	I	R	G	I	I	R	Q	H	Q	F	D	K	V	E	L	V	K	I	V	H	P	D	T	S	Y	D	E	L	E	K	L	V	K	D	A	E	E	V	L	Q	L	L	G	L	P
Template Known Secondary structure			G	G	G	T	T					T	T	T																	S			S	S	S		S	S	S	S	S		S													G	G	G																				T
Template Predicted Secondary structure
Template SS confidence
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	H	V	T	L	E	L	N	S	I	G	S	L	E	A
Query Conservation
Alig confidence		.	.
Template Conservation		.	.
Template Sequence		.	.	Y	R	V	V	E	L	C	T	G	D	L	G	F
Template Known Secondary structure		.	.								T	T	T			T
Template Predicted Secondary structure		.	.
Template SS confidence
				317	.	.	320	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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