Job Description P60906 Confidence 99.85% Date Thu Jan 5 12:07:14 GMT 2012 Rank 49 Aligned Residues 158 % Identity 15% Template c2dq0A_ PDB info PDB header:ligase Chain: A: PDB Molecule:seryl-trna synthetase; PDBTitle: crystal structure of seryl-trna synthetase from pyrococcus2 horikoshii complexed with a seryl-adenylate analog Resolution 2.60 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	G	M	N	D	Y	L	P	G	E	T	A	I	W	Q	R	I	E	G	T	L	K	N	V	L	G	S	Y	G	Y	S	E	I	R	L	P	I	V	E	Q	T	P	L	F	K	R	A	I	G	E	V	T	D	V	V	E	K	E	M	Y	T	F	E	D	R	N	G	D	S	L	T	L	R	P	E	G	T	A	G	C
Query Conservation
Alig confidence																																																	.	.														.	.	.
Template Conservation																																																	.	.														.	.	.
Template Sequence		S	R	F	Y	Y	L	L	N	E	I	V	I	L	D	L	A	L	I	R	F	A	L	D	R	L	I	E	K	G	F	T	P	V	I	P	P	Y	M	V	R	R	F	V	E	E	G	S	.	.	T	S	F	E	D	F	E	D	V	I	Y	K	V	.	.	.	E	D	E	D	L	Y	L	I	P	T	A	E	H	P	L
Template Known Secondary structure		T	T																										T	T								S									T	T	.	.	S		T	T					T			B		.	.	.	T	T	S	S					S	S	T
Template Predicted Secondary structure																																																	.	.														.	.	.
Template SS confidence
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.			230	.	.	.	.	.	.	.	.	.	240	.	.				.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
		89	90	.	.	.	.		.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.								.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.			.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure								.																						.	.	.	.	.	.	.																												.	.
Query SS confidence								.																						.	.	.	.	.	.	.																												.	.
Query Sequence		V	R	A	G	I	E	.	H	G	L	L	Y	N	Q	E	Q	R	L	W	Y	I	G	P	M	F	R	H	E	.	.	.	.	.	.	.	R	P	Q	K	G	R	Y	R	Q	F	H	Q	L	G	C	E	V	F	G	L	Q	G	P	D	I	D	A	.	.	E	L	I	M	L	T	A	R	W	W	R	A	L	G	I	S
Query Conservation								.																						.	.	.	.	.	.	.																												.	.
Alig confidence								.																						.	.	.	.	.	.	.																												.	.
Template Conservation
Template Sequence		A	G	M	H	A	N	E	I	L	D	G	K	D	L	P	L	L	Y	V	G	V	S	P	C	F	R	K	E	A	G	T	A	G	K	D	T	K	G	I	F	R	V	H	Q	F	H	K	V	E	Q	F	V	Y	S	R	P	E	E	S	W	E	W	H	E	K	I	I	R	N	A	E	E	L	F	Q	E	L	E	I	P
Template Known Secondary structure				T	T	T	T					T	T	T		S														T	T		S	S		S			S	S	S	S		S													T	T	T																			T	T
Template Predicted Secondary structure
Template SS confidence
		258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	H	V	T	L	E	L	N	S	I	G	S	L	E	A
Query Conservation
Alig confidence		.	.
Template Conservation		.	.
Template Sequence		.	.	Y	R	V	V	N	I	C	T	G	D	L	G	Y
Template Known Secondary structure		.	.								G	G	G	S		S
Template Predicted Secondary structure		.	.
Template SS confidence
				338	.	340	.	.	.	.	.	.	.	.	.	350

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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