Job Description P60906 Confidence 100.00% Date Thu Jan 5 12:07:14 GMT 2012 Rank 24 Aligned Residues 310 % Identity 22% Template c1z7nB_ PDB info PDB header:transferase Chain: B: PDB Molecule:atp phosphoribosyltransferase regulatory subunit; PDBTitle: atp phosphoribosyl transferase (hiszg atp-prtase) from2 lactococcus lactis with bound prpp substrate Resolution 3.25 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	A	I	R	G	M	N	D	Y	L	P	G	E	T	A	I	W	Q	R	I	E	G	T	L	K	N	V	L	G	S	Y	G	Y	S	E	I	R	L	P	I	V	E	Q	T	P	L	F	K	R	A	I	G	E	V	T	D	V	V	E	K	E	M	Y	T	F	E	D	R	N	G	D	S	L	T	L	R	P	E	G	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	L	P	E	E	S	A	E	M	T	L	N	Q	V	K	S	L	R	Q	I	E	G	R	L	R	K	L	F	S	L	K	N	Y	Q	E	V	M	P	P	S	F	E	Y	T	Q	L	Y	T	A	L	E	S	N	G	K	T	F	N	Q	E	K	M	F	Q	F	I	K	H	E	G	Q	S	I	T	L	R	Y	D	F	T
Template Known Secondary structure					S	S																										T	T								S									T				S	S	S	S			T	T	T	B						S	S										S
Template Predicted Secondary structure
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	C	V	R	A	G	I	E	H	G	L	L	Y	N	Q	E	Q	R	L	W	Y	I	G	P	M	F	R	H	E	R	P	Q	K	G	R	Y	R	Q	F	H	Q	L	G	C	E	V	F	G	L	Q	G	P	D	I	D	A	E	L	I	M	L	T	A	R	W	W	R	A	L	G	I	S	E	H	V	T	L	E	L
Query Conservation
Alig confidence												.	.																																																															.
Template Conservation												.	.																																																															.
Template Sequence		L	P	L	V	R	L	Y	S	Q	I	.	.	K	D	S	T	S	A	R	Y	S	Y	F	G	K	I	F	R	K	E	K	R	H	K	G	R	S	T	E	N	Y	Q	I	G	I	E	L	F	G	E	S	A	D	K	S	E	L	E	I	L	S	L	A	L	Q	V	I	E	Q	L	G	L	N	K	.	T	V	F	E	I
Template Known Secondary structure										T		.	.	S	S														B				S	S	S	S			S											S	S																					T		S	S	.
Template Predicted Secondary structure												.	.																																																															.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.			.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.		.	160	.	.	.
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190						.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure																											.	.	.	.	.
Query SS confidence																											.	.	.	.	.
Query Sequence		N	S	I	G	S	L	E	A	R	A	N	Y	R	D	A	L	V	A	F	L	E	Q	H	K	E	.	.	.	.	.	K	L	D	E	D	C	K	R	R	M	Y	T	N	P	L	R	V	L	D	S	K	N	P	E	V	Q	A	L	L	N	D	A	P	A	L	G	D	Y	L	D	E	E	S	R	E	H	F	A	G	L
Query Conservation																											.	.	.	.	.
Alig confidence																											.	.	.	.	.
Template Conservation
Template Sequence		G	S	A	K	F	F	Q	R	L	C	Q	L	A	D	G	S	T	E	L	L	T	E	L	L	L	K	K	D	L	S	G	L	N	A	F	I	E	K	N	N	F	S	K	E	L	R	G	L	L	K	E	I	F	I	T	N	E	L	S	R	L	E	N	L	V	T	N	T	K	D	D	V	L	I	S	S	F	D	Q	L
Template Known Secondary structure														T	T	T												T												S														T	S															T
Template Predicted Secondary structure
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
		241	.	.	.	.	.	.	.	.			250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure											.	.
Query SS confidence											.	.
Query Sequence		C	K	L	L	E	S	A	G	I	.	.	A	Y	T	V	N	Q	R	L	V	R	G	L	D	Y	Y	N	R	T	V	F	E	W	V	T	N	S	L	G	S	Q	G	T	V	C	A	G	G	R	Y	D	G	L	V	E	Q	L	G	G	R	A	T	P	A	V	G	F	A	M	G	L	E	R	L	V	L	L	V	Q	A
Query Conservation											.	.
Alig confidence											.	.																														.	.																.
Template Conservation																																										.	.																.
Template Sequence		K	E	F	S	E	K	L	S	M	I	K	P	I	I	I	D	L	G	M	V	P	K	M	D	Y	Y	T	D	L	M	F	K	A	Y	S	S	A	A	N	Q	.	.	P	I	L	S	G	G	R	Y	D	Q	L	L	S	N	F	.	Q	E	E	A	F	A	I	G	F	C	C	H	M	D	T	I	L	K	A	L	E	R
Template Known Secondary structure								T	T	T	T	S						T	T				S	S	T	T			S								T	T		S	S	.	.		S												T	S	.	S		S
Template Predicted Secondary structure																																										.	.																.
Template SS confidence
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.			.	.	.	.	.	.	290	.	.	.	.	.	.	.	.		.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
		319	320	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	N	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	E	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		321	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions