Job Description P60906 Confidence 99.86% Date Thu Jan 5 12:07:14 GMT 2012 Rank 46 Aligned Residues 161 % Identity 14% Template c1wleB_ PDB info PDB header:ligase Chain: B: PDB Molecule:seryl-trna synthetase; PDBTitle: crystal structure of mammalian mitochondrial seryl-trna2 synthetase complexed with seryl-adenylate Resolution 1.65 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.		.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure																																																												.
Query SS confidence																																																												.
Query Sequence		R	G	M	N	D	Y	L	P	G	E	T	A	I	W	Q	R	I	E	G	T	L	K	N	V	L	G	S	Y	G	Y	S	E	I	R	L	P	I	V	E	Q	T	P	L	F	K	R	A	I	G	E	V	T	D	V	V	E	K	E	.	M	Y	T	F	E	D	R	N	G	D	S	L	T	L	R	P	E	G	T	A	G
Query Conservation																																																												.
Alig confidence																																																	.	.										.
Template Conservation																																																	.	.
Template Sequence		H	R	S	Y	Y	L	R	G	A	G	A	L	L	Q	H	G	L	V	N	F	T	L	N	K	L	I	H	R	G	F	T	P	M	T	V	P	D	L	L	R	G	V	V	F	E	G	C	.	.	G	M	T	P	N	A	K	P	S	Q	I	Y	N	I	D	P	S	R	F	E	D	L	N	L	A	G	T	A	E	V	G
Template Known Secondary structure		T	T						T																				T	T								S											.	.	T			T	T	S	S	S		S	S		B			T	T	T	S	S	S					S	S
Template Predicted Secondary structure																																																	.	.
Template SS confidence
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.			.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
		88	.	90	.	.	.	.		.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.							.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.					.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure									.																						.	.	.	.	.	.																						.	.	.	.
Query SS confidence									.																						.	.	.	.	.	.																						.	.	.	.
Query Sequence		C	V	R	A	G	I	E	.	H	G	L	L	Y	N	Q	E	Q	R	L	W	Y	I	G	P	M	F	R	H	E	.	.	.	.	.	.	R	P	Q	K	G	R	Y	R	Q	F	H	Q	L	G	C	E	V	F	G	L	Q	.	.	.	.	G	P	D	I	D	A	E	L	I	M	L	T	A	R	W	W	R	A	L	G
Query Conservation									.																						.	.	.	.	.	.																						.	.	.	.
Alig confidence									.																						.	.	.	.	.	.																						.	.	.	.
Template Conservation
Template Sequence		L	A	G	Y	F	M	D	H	S	V	A	F	R	D	L	P	I	R	M	V	C	S	S	T	C	Y	R	A	E	T	D	T	G	K	E	P	W	G	L	Y	R	V	H	H	F	T	K	V	E	M	F	G	V	T	G	P	G	L	E	Q	S	S	E	L	L	E	E	F	L	S	L	Q	M	E	I	L	T	E	L	G
Template Known Secondary structure							T	T					G	G	G		S															S	S					S	S	S	T	T		S													S	S																						T	T
Template Predicted Secondary structure
Template SS confidence
		287	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	S	E	H	V	T	L	E	L	N	S	I	G	S	L	E	A
Query Conservation
Alig confidence				.	.
Template Conservation				.	.
Template Sequence		L	H	.	.	F	R	V	L	D	M	P	T	Q	E	L	G	L
Template Known Secondary structure				.	.								G	G	G	S	T	T
Template Predicted Secondary structure				.	.
Template SS confidence
		367	.			.	370	.	.	.	.	.	.	.	.	.	380	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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