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Job DescriptionP60906
Confidence100.00%DateThu Jan 5 12:07:14 GMT 2012
Rank12Aligned Residues367
% Identity18%Templatec1nyqA_
PDB info PDB header:ligaseChain: A: PDB Molecule:threonyl-trna synthetase 1; PDBTitle: structure of staphylococcus aureus threonyl-trna synthetase2 complexed with an analogue of threonyl adenylate
Resolution3.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   910.........20.........30.........40.........50.........60.........70.... .....80.......
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Query Sequence  RGMNDYLPGETAIWQRIEGTLKNVLGSYGYSEIRLPIVEQTPLFKRAIGEVTDVVEKEMYTFEDRN. GDSLTLRPEGTAG
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Template Sequence  AGLPLWLPNGATIRREIERYIVDKEVSMGYDHVYTPVLANVDLYKTS. . GHWDHYQEDMFPPMQLDETESMVLRPMNCPH
Template Known Secondary structure  TT


TT




ST..TSTTTTTTTS


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STTS


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   261........270.........280.........290.........300....... ..310.........320.........330........
 
   88.90.... .....100.........110.........120 .........130.........140. ........150........ .
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Query Sequence  CVRAGIE. HGLLYNQEQRLWYIGPMFRHERPQKG. . . . RYRQFHQLGCEVFGLQGPDID. . AELIMLTARWWRALGIS. E
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Template Sequence  HMMIYANKPHSYRELPIRIAELGTMHRYEASGAVSGLQRVRGMTLNDSHIFVRPDQIKEEFKRVVNMIIDVYKDFGFEDY
Template Known Secondary structure  TS

BTTT
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TTT
BTTTB
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GGGTT



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   339340.........350.........360.........370.........380.........390.........400.........410........
 
   160.........170.........180.........190.........200.........210.........220.........230.........
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Query Sequence  HVTLELNSIGSLEARANYRDALVAFLEQHKEKLDEDCKRRMYTNPLRVLDSKNPEVQALLNDAPALGDYLDEESREHFAG
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Template Sequence  SFRLSYRDPEDKEKYFDDDDMWNKAENMLKEAADELGLSYEEAIGEAAFYG. . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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S


SSSS

T



T
SBTTB.............................
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   419420.........430.........440.........450.........460.........
 
   240.........250.........260.........270.........280.........290.........300.........310...... .
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Query Sequence  LCKLLESAGIAYTVNQRLVRGLDYYNRTVFEWVTNSLGSQGTVCAGGRYDGLVEQLGGRATPAVGFAMGLERLVLLV. . Q
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Template Sequence  . . . . . . . . . PKLDVQVKTAMGKEETLSTAQ. . . . . . LDFLLPERFDLTYIGQDGEHHRPVVIHRGVVSTMERFVAFLTEE
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TTS
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Query Sequence  AVNPEFKADPVVDIYLVASG. ADTQSAAMALAERLRDELPGVKLMTNHGGGNFKKQFARADKWGARVAVVLGESEVANGT
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Template Sequence  TKGAFPTWLAPKQVQIIPVNVDLHYDYARQLQDELKSQ. . GVRVSIDDRNEKMGYKIREAQMQKIPYQIVVGDKEVENNQ
Template Known Secondary structure  TT


TTT
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SSTTTTTT..T




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   535....540.........550.........560.........570.. .......580.........590.........600.........610..
 
   397..400.........410.........420...
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Query Sequence  AVVKDLRSGEQTAVAQDSVAAHLRTLL
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Template Sequence  VNVRQYGSQDQETVEKDEFIWNLVDEI
Template Known Secondary structure  SSSS

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   613......620.........630.........
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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