Job Description P24215 Confidence 99.63% Date Thu Jan 5 11:41:18 GMT 2012 Rank 28 Aligned Residues 229 % Identity 18% Template d2glka1 SCOP info TIM beta/alpha-barrel Xylose isomerase-like Xylose isomerase Resolution 0.94

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		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.						.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.		.	.	70	.	.	.	.	.							.	.	.	.	80	.	.	.
Predicted Secondary structure																			.	.	.	.	.																																				.									.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.																																				.									.	.	.	.	.	.
Query Sequence		L	A	D	V	R	Q	A	G	A	T	G	V	V	T	A	L	H	.	.	.	.	.	H	I	P	N	G	E	V	W	S	V	E	E	I	L	K	R	K	A	I	I	E	D	A	G	L	V	W	S	V	V	E	S	V	P	I	.	H	E	D	I	K	T	H	T	.	.	.	.	.	.	G	N	Y	E	Q	W	I	A
Query Conservation																			.	.	.	.	.																																				.									.	.	.	.	.	.
Alig confidence														.	.				.	.	.	.	.																																				.									.	.	.	.	.	.
Template Conservation														.	.
Template Sequence		V	R	R	L	A	E	L	G	A	H	G	V	.	.	T	F	H	D	D	D	L	I	P	F	G	S	S	D	S	E	R	E	E	H	V	K	R	F	R	Q	A	L	D	D	T	G	M	K	V	P	M	A	T	T	N	L	F	T	H	P	V	F	K	D	G	G	F	T	A	N	D	R	D	V	R	R	Y	A	L	R
Template Known Secondary structure								T	T					.	.								S		T	T																					T		B									S	S	S	G	G	G	T	T		S	T	T		S	S
Template Predicted Secondary structure														.	.
Template SS confidence
		40	.	.	.	.	.	.	.	.	.	50	.			.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	Y	Q	Q	T	L	R	N	L	A	Q	C	G	I	R	T	V	C	Y	N	F	M	P	V	L	D	W	T	R	T	D	L	E	Y	V	L	P	D	G	S	K	A	L	R	F	D	Q	I	E	F	A	A	F	E	M	H	I	L	K	R	P	G	A	E	A	D	Y	T	E	E	E	I	A	Q	A	A	E	R	F	A
Query Conservation
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	T	I	R	N	I	D	L	A	V	E	L	G	A	E	T	Y	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	W	G	G	R	E	G	A	E	S	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure													T	T		S				.	.	.	.	.	.	.	.	.	.	.	.	.	.				T	T				S	S	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.															.	.	.	.	140	.	.	.	.	.	.	.
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.			.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure																																																																		.	.
Query SS confidence																																																																		.	.
Query Sequence		T	M	S	D	E	D	K	A	R	L	T	R	N	I	I	A	G	L	P	G	A	E	E	G	Y	T	L	D	Q	F	R	K	H	L	E	L	Y	K	D	I	D	K	A	K	L	R	E	N	F	A	V	F	L	K	A	I	I	P	V	A	E	E	V	G	.	.	V	R	M	A	V	H	P	D	D	P	P	R	P	I
Query Conservation																																																																		.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.								.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	K	D	V	R	D	A	L	D	R	M	K	E	A	F	D	L	L	G	E	Y	V	T	S	Q	G	Y	D	I	R	F	A	I	E	P	.	.	.	.	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G																									T										.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.
Template SS confidence
																																								148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
		242	.	.	.	.							.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.		.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.			.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
Predicted Secondary structure							.	.	.	.	.	.																				.																											.	.
Query SS confidence							.	.	.	.	.	.																				.																											.	.
Query Sequence		L	G	L	P	R	.	.	.	.	.	.	I	V	S	T	I	E	D	M	Q	W	M	V	D	T	V	N	S	M	A	.	N	G	F	T	M	C	T	G	S	Y	G	V	R	A	D	N	D	L	V	D	M	I	K	Q	F	G	.	.	P	R	I	Y	F	T	H	L	R	S	T	M	R	E	D	N	P	K	T	F	H
Query Conservation							.	.	.	.	.	.																				.																											.	.
Alig confidence		.	.				.	.	.	.	.	.																				.										.																	.	.
Template Conservation		.	.																																							.
Template Sequence		.	.	K	P	N	E	P	R	G	D	I	L	L	P	T	V	G	H	A	L	A	F	I	E	R	L	E	R	P	E	L	Y	G	V	N	P	E	V	G	H	.	E	Q	M	A	G	L	N	F	P	H	G	I	A	Q	A	L	W	A	G	K	L	F	H	I	D	L	N	G	Q	N	G	I	K	Y	D	Q	D	L	R
Template Known Secondary structure		.	.		S	S	S	S	S	S			S	S		S									T	T	S	S	S	G	G	G						B				.			T	T	T													T	T		B							B			S	S	S	S				B
Template Predicted Secondary structure		.	.																																							.
Template SS confidence
				183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220		.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
		313	.	.	.	.	.	.	320	.	.		.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.
Predicted Secondary structure												.
Query SS confidence												.
Query Sequence		E	A	A	H	L	N	G	D	V	D	.	M	Y	E	V	V	K	A	I	V	E	E	E	H	R	R	K	A	E	G	K	E	D	L	I	P	M	R
Query Conservation												.
Alig confidence		.	.	.								.																							.	.
Template Conservation		.	.	.																															.	.
Template Sequence		.	.	.	F	G	A	G	D	L	R	A	A	F	W	L	V	D	L	L	E	S	A	G	Y	S	G	P	R	H	F	D	F	K	.	.	P	P	R
Template Known Secondary structure		.	.	.	T	T	S	S																T			S								.	.			T
Template Predicted Secondary structure		.	.	.																															.	.
Template SS confidence
					260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.			290	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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