 |
Job Description | P24215 | Confidence | 59.01% | Date | Thu Jan 5 11:41:18 GMT 2012 |
Rank | 72 | Aligned Residues | 49 |
% Identity | 12% | Template | d1vema2 |
SCOP info | TIM beta/alpha-barrel
| (Trans)glycosidases
| Amylase, catalytic domain
|
Resolution | 1.85 |
|
  |   |
16 | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | |
|
|
|
. | |
. | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|
|  |  |  |
|
|
|
| . | . | . | . |
| . |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | A | D | V | R | Q | A | G | A | T | G | V | V | T | A | L | H | H | I | . |
. |
. |
. |
P | . |
N | G | E | V | W | S | V | E | E | I | L | K | R | K | A | I | I | E | D | A | G | L | V | W | S | V | V | E | S | V |
Query Conservation |   |
|   |   |
|
|
|   |
|
|
|   |
|
|   |   |
|   |   |   | . | . | . | . |
| . |   |
|   |   |
|   |   |
|   |
|   |   |   |
|   |   |
|
|   |   |
|
|   |   |   |
|
|
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
| . | . | . | . |
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|
|   |
|
|
|
|   |
|   |
|
|
|   | . |
|
|   |
|
|
|   |   |
|
|   |
|
|
|
|   |
|
|   |
|   |
|
|   |   |   |   |
|
|
|
|
|   |
|
|
|
|
Template Sequence |   |
L | R | W | A | K | Q | N | G | F | Y | A | I | T | V | D | F | W | . |
W | G | D | M | E | K | N | G | D | Q | Q | F | D | F | S | Y | A | Q | R | F | A | Q | S | V | K | N | A | G | M | K | M | I | P | I | I | S | T |
Template Known Secondary structure |   |
 |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  |  | . |  |  |  |  | T |
| S | S | T | T |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  |  |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  | . |
|  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
35 | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | |
. | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|