Return to main results Retrieve Phyre Job Id

Job DescriptionP24215
Confidence34.33%DateThu Jan 5 11:41:18 GMT 2012
Rank132Aligned Residues46
% Identity17%Templated1j0ha3
SCOP infoTIM beta/alpha-barrel (Trans)glycosidases Amylase, catalytic domain
Resolution1.90

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   16...20....... ..30....... ..40.........50.........60.
Predicted Secondary structure 





.






.............






Query SS confidence 











.









. . . . . . . . . . . . .























Query Sequence  LADVRQAGATGV. VTALHHIPNG. . . . . . . . . . . . . EVWSVEEILKRKAIIEDAGLVWSV
Query Conservation 
  


 


 
.
  
   
 
.............  
  
 
   
  

  

   
Alig confidence 











.









.............























Template Conservation 



  

   
 
 

       

   
   

   

  


 

  

  

 


Template Sequence  LDYLVDLGITGIYLTPIFRSPSNHKYDTADYFEVDPHFGDKETLKTLIDRCHEKGIRVML
Template Known Secondary structure  T





SSSS

S
S
TTT

TT
Template Predicted Secondary structure 
































Template SS confidence 



























































   182.......190.........200.........210.........220.........230.........240.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions