Return to main results Retrieve Phyre Job Id

Job DescriptionP24215
Confidence40.26%DateThu Jan 5 11:41:18 GMT 2012
Rank101Aligned Residues136
% Identity15%Templated1foba_
SCOP infoTIM beta/alpha-barrel (Trans)glycosidases beta-glycanases
Resolution1.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   16...20.........30.........40.........50.........60. ........70.........80...
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Query Sequence  LADVRQAGATGVVTALHHIPNGEVWSVEEILKRKAIIEDAGLVWSV. . . . . . . . . . . . VESVPIHEDIKTHTGNYEQWIA
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Template Sequence  ETILADAGINSIRQRVWVNPSDGSYDLDYNLELAKRVKAAGMSLYLDLHLSDTWADPSDQTTPSGWSTTDLGTLKWQLYN
Template Known Secondary structure  T


S

TT
TT
TT


SSS

BTTB
B

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   33......40.........50.........60.........70.........80.........90.........100.........110..
 
   84.....90.........100.........110.........120.........130.........140.........150.........160...
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Query Sequence  NYQQTLRNLAQCGIRTVCYNFMPVLDWTRTDLEYVLPDGSKALRFDQIEFAAFEMHILKRPGAEADYTEEEIAQAAERFA
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Template Sequence  YTLEVCNTFAENDIDIEIISI. . . . . GNEIRAGLLWPLG. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  TT


S.....SSSGGG
SSBTTT.........................................
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   113......120.........130... ......140......
 
   164.....170.........180.........190.........200.........210.........220....... ..230........
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Query Sequence  TMSDEDKARLTRNIIAGLPGAEEGYTLDQFRKHLELYKDIDKAKLRENFAVFLKAIIPVAEEVG. . . . VRMAVHPDDPP
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ETSSYSNIGALLHSGAWGVKDSNLATTPKIMIHLDDGW
Template Known Secondary structure  .........................................STT
TS

SS

S
TT
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   147..150.........160.........170.........180....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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