Job Description P24215 Confidence 99.66% Date Thu Jan 5 11:41:18 GMT 2012 Rank 27 Aligned Residues 249 % Identity 22% Template d1bxca_ SCOP info TIM beta/alpha-barrel Xylose isomerase-like Xylose isomerase Resolution 2.30

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		4	.	.	.	.	.	10	.								.	.	.	.	.	.	.					.	20	.	.	.	.	.	.	.	.	.	30	.	.	.				.	.	.	.	.	.			40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.
Predicted Secondary structure										.	.	.	.	.	.	.								.	.	.	.																.	.	.							.	.
Query SS confidence										.	.	.	.	.	.	.								.	.	.	.																.	.	.							.	.
Query Sequence		T	W	R	W	Y	G	P	N	.	.	.	.	.	.	.	D	P	V	S	L	A	D	.	.	.	.	V	R	Q	A	G	A	T	G	V	V	T	A	L	H	H	.	.	.	I	P	N	G	E	V	.	.	W	S	V	E	E	I	L	K	R	K	A	I	I	E	D	A	G	L	V	W	S	V	V	E	S	V	P	I
Query Conservation										.	.	.	.	.	.	.								.	.	.	.																.	.	.							.	.
Alig confidence										.	.	.	.	.	.	.								.	.	.	.										.	.					.	.	.							.	.
Template Conservation																																					.	.
Template Sequence		T	V	G	N	V	G	R	D	P	F	G	D	A	V	R	E	R	L	D	P	V	Y	V	G	H	K	L	A	E	L	G	V	H	G	V	.	.	N	L	H	D	E	D	L	I	P	R	G	T	P	P	Q	E	R	D	Q	I	V	R	R	F	K	R	A	L	D	E	T	G	L	K	V	P	M	V	T	G	N	L	F
Template Known Secondary structure				T					B	T	T	B				S																T		S			.	.								S		S	S																					T		B									S
Template Predicted Secondary structure																																					.	.
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50			.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
			68	.	70	.	.	.	.	.							.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure		.									.	.	.	.	.	.
Query SS confidence		.									.	.	.	.	.	.
Query Sequence		.	H	E	D	I	K	T	H	T	.	.	.	.	.	.	G	N	Y	E	Q	W	I	A	N	Y	Q	Q	T	L	R	N	L	A	Q	C	G	I	R	T	V	C	Y	N	F	M	P	V	L	D	W	T	R	T	D	L	E	Y	V	L	P	D	G	S	K	A	L	R	F	D	Q	I	E	F	A	A	F	E	M	H	I
Query Conservation		.									.	.	.	.	.	.
Alig confidence		.									.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	D	P	G	F	K	D	G	G	F	T	S	R	D	P	W	V	R	A	Y	A	F	R	K	S	L	E	T	M	D	L	G	A	E	L	G	A	E	I	Y	V	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	W	P	G	R	E	G	A	E	V	E	A	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		S	S	G	G	G	T	T		S	T	T		S	S																					T	T							.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T				S		G	G	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.															.	.	.	.	140	.	.	.	.	.	.
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure
Query SS confidence
Query Sequence		L	K	R	P	G	A	E	A	D	Y	T	E	E	E	I	A	Q	A	A	E	R	F	A	T	M	S	D	E	D	K	A	R	L	T	R	N	I	I	A	G	L	P	G	A	E	E	G	Y	T	L	D	Q	F	R	K	H	L	E	L	Y	K	D	I	D	K	A	K	L	R	E	N	F	A	V	F	L	K	A	I	I
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	G	K	A	R	K	V	W	D	W	V	R	E	P	L	N	F	M	A
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G		G	G	G	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																																																															147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		221	.	.	.	.	.	.			.	.	230	.	.	.	.	.	.		.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.		.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.			.	.	.
Predicted Secondary structure									.	.										.																														.																											.	.
Query SS confidence									.	.										.																														.																											.	.
Query Sequence		P	V	A	E	E	V	G	.	.	V	R	M	A	V	H	P	D	D	.	P	P	R	P	I	L	G	L	P	R	I	V	S	T	I	E	D	M	Q	W	M	V	D	T	V	N	S	M	A	.	N	G	F	T	M	C	T	G	S	Y	G	V	R	A	D	N	D	L	V	D	M	I	K	Q	F	G	.	.	P	R	I
Query Conservation									.	.										.																														.																											.	.
Alig confidence									.	.										.							.	.	.	.																				.										.																	.	.
Template Conservation																											.	.	.	.																														.
Template Sequence		A	Y	A	E	D	Q	G	Y	G	Y	R	F	A	L	E	P	K	P	N	E	P	R	G	D	I	.	.	.	.	Y	F	A	T	V	G	S	M	L	A	L	I	H	T	L	E	R	P	E	R	F	G	L	N	P	E	F	A	H	.	E	T	M	A	G	L	N	F	V	H	A	V	A	Q	A	L	D	A	G	K	L
Template Known Secondary structure								T											S	S	S	S	S	S			.	.	.	.	S	S		S									T	T	S	S	S	G	G	G						B				.			T	T	T														T		B
Template Predicted Secondary structure																											.	.	.	.																														.
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190					.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		295	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	F	T	H	L	R	S	T	M	R	E	D	N	P	K	T	F	H	E	A	A	H	L	N	G	D	V	D	M	Y	E	V	V	K	A	I	V	E	E	E	H	R	R	K	A	E	G	K	E	D	L	I	P	M	R	P	D
Query Conservation
Alig confidence											.	.																																								.	.
Template Conservation											.	.																																								.	.
Template Sequence		L	H	I	D	L	N	G	Q	R	.	.	M	N	R	F	D	Q	D	L	R	F	G	S	E	N	L	K	A	A	F	L	L	V	D	L	L	E	S	S	G	Y	Q	G	P	R	H	F	D	A	H	.	.	A	L	R	T	E
Template Known Secondary structure								B			.	.	S	S	S	S				B		T	T	S	S															T	T			S								.	.			T	T
Template Predicted Secondary structure											.	.																																								.	.
Template SS confidence
		241	.	.	.	.	.	.	.	.			250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.			.	290	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions