Job Description P24215 Confidence 22.90% Date Thu Jan 5 11:41:18 GMT 2012 Rank 200 Aligned Residues 72 % Identity 15% Template c3qi7A_ PDB info PDB header:transcription Chain: A: PDB Molecule:putative transcriptional regulator; PDBTitle: crystal structure of a putative transcriptional regulator2 (yp_001089212.1) from clostridium difficile 630 at 1.86 a resolution Resolution 1.86 Å

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		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.		.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.													.	.
Predicted Secondary structure																																																.																				.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																.																				.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	A	I	I	P	V	A	E	E	V	G	V	R	M	A	V	H	P	D	D	P	P	R	P	I	L	G	L	P	R	I	V	S	T	I	E	D	M	Q	W	M	V	D	T	V	N	.	S	M	A	N	G	F	T	M	C	T	G	S	Y	G	V	R	A	D	N	.	.	.	.	.	.	.	.	.	.	.	.	D	L
Query Conservation																																																.																				.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																					.	.	.	.	.	.	.	.																				.																				.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																					.	.	.	.	.	.	.	.
Template Sequence		K	V	L	A	E	R	S	K	E	X	G	A	K	A	F	I	H	Y	A	.	.	.	.	.	.	.	.	S	T	D	D	L	K	D	V	N	I	A	K	R	L	E	X	I	K	E	T	C	K	N	I	G	L	P	F	V	Q	V	N	T	P	N	I	N	T	E	E	D	K	N	K	V	K	Q	F	L	N	E	D	I
Template Known Secondary structure											T	T		S							.	.	.	.	.	.	.	.		T	T	G	G	G	S																	T	T												S	S	T
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.									.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		284	.	.	.	.	.	290	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	D	M	I	K	Q	F	G	P	R	I	Y	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	K	Q	V	K	K	Y	G	K	D	I	N	V
Template Known Secondary structure										S
Template Predicted Secondary structure
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions