Job Description P24215 Confidence 94.77% Date Thu Jan 5 11:41:18 GMT 2012 Rank 41 Aligned Residues 216 % Identity 21% Template c3p14C_ PDB info PDB header:isomerase Chain: C: PDB Molecule:l-rhamnose isomerase; PDBTitle: crystal structure of l-rhamnose isomerase with a novel high thermo-2 stability from bacillus halodurans Resolution 2.51 Å

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		16	.	.	.	20	.			.	.	.	.	.	.	.	.	30	.	.				.	.	.	.	.	.	.			40				.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.								.	.	.	.
Predicted Secondary structure								.	.												.	.	.								.	.		.	.	.																																			.	.	.	.	.	.	.
Query SS confidence								.	.												.	.	.								.	.		.	.	.																																			.	.	.	.	.	.	.
Query Sequence		L	A	D	V	R	Q	.	.	A	G	A	T	G	V	V	T	A	L	H	.	.	.	H	I	P	N	G	E	V	.	.	W	.	.	.	S	V	E	E	I	L	K	R	K	A	I	I	E	D	A	G	L	V	W	S	V	V	E	S	V	P	I	H	E	D	I	K	T	H	.	.	.	.	.	.	.	T	G	N	Y
Query Conservation								.	.												.	.	.								.	.		.	.	.																																			.	.	.	.	.	.	.
Alig confidence								.	.							.	.				.	.	.								.	.		.	.	.																																			.	.	.	.	.	.	.
Template Conservation																.	.
Template Sequence		L	E	K	A	L	S	L	I	P	G	K	H	R	V	.	.	N	L	H	A	I	Y	A	E	T	D	G	K	V	V	E	R	D	Q	L	E	P	R	H	F	E	K	W	V	R	W	A	K	R	H	G	L	G	L	D	F	N	P	T	L	F	S	H	E	K	A	K	D	G	L	T	L	A	H	P	D	Q	A	I	R
Template Known Secondary structure							T	T	S		S					.	.				G	G	G				S	S					G	G	G			G	G	G	G											T										S	S	S	G	G	G	T	T	S		S	T	T		S	S
Template Predicted Secondary structure																.	.
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90			.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.				.	.	.	.		.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure															.	.	.					.
Query SS confidence															.	.	.					.
Query Sequence		E	Q	W	I	A	N	Y	Q	Q	T	L	R	N	.	.	.	L	A	Q	C	.	G	I	R	T	V	C	Y	N	F	M	P	V	L	D	W	T	R	T	D	L	E	Y	V	L	P	D	G	S	K	A	L	R	F	D	Q	I	E	F	A	A	F	E	M	H	I	L	K	R	P	G	A	E	A	D	Y	T	E	E	E
Query Conservation															.	.	.					.
Alig confidence															.	.	.					.										.	.	.	.	.	.	.	.	.	.	.	.	.	.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																.	.	.	.	.	.	.	.	.	.	.	.	.	.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	F	W	I	D	H	C	I	A	S	R	K	I	G	E	Y	F	G	K	E	L	E	T	P	C	L	T	N	I	W	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	P	D	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																							T	S								.	.	.	.	.	.	.	.	.	.	.	.	.	.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.	.	.	.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.															.	.	.	.
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220		.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure																																																																				.
Query SS confidence																																																																				.
Query Sequence		I	A	Q	A	A	E	R	F	A	T	M	S	D	E	D	K	A	R	L	T	R	N	I	I	A	G	L	P	G	A	E	E	G	Y	T	L	D	Q	F	R	K	H	L	E	L	Y	K	D	I	D	K	A	K	L	R	E	N	F	A	V	F	L	K	A	I	I	.	P	V	A	E	E	V	G	V	R	M	A	V	H
Query Conservation																																																																				.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	K	D	T	P	S	D	R	L	T	P	R	K	R	L	K	E	S	L	D	Q	I	F	A	A	E	I	N	E	A	Y	N	L	D	A	V	E
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	S			S		S															T		S				T	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																																													189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.		.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
Predicted Secondary structure																																																		.
Query SS confidence																																																		.
Query Sequence		P	D	D	P	P	R	P	I	L	G	L	P	R	I	V	S	T	I	E	D	M	Q	W	M	V	D	T	V	N	S	M	A	N	G	F	T	M	C	T	G	S	Y	G	V	R	A	D	N	.	D	L	V	D	M	I	K	Q	F	G	P	R	I	Y	F	T	H	L	R	S	T	M	R	E	D	N	P	K	T	F	H
Query Conservation																																																		.
Alig confidence		.	.	.	.	.																																												.																							.	.	.	.
Template Conservation		.	.	.	.	.																																																																			.	.	.	.
Template Sequence		.	.	.	.	.	S	K	L	F	G	I	G	S	E	S	Y	V	V	G	S	H	E	F	Y	L	S	Y	A	L	K	N	D	K	L	C	L	L	D	T	G	H	Y	H	P	T	E	T	V	S	N	K	I	S	A	M	L	L	F	H	D	K	L	A	L	H	V	S	R	P	V	R	.	.	.	.	W	D	S	D	H
Template Known Secondary structure		.	.	.	.	.			S		B	T	T	B		S			S	S												T	T							T	T	S	S		T	T			S												S								B		S	S	.	.	.	.	S				B
Template Predicted Secondary structure		.	.	.	.	.																																																																			.	.	.	.
Template SS confidence
							226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.					.	.	.	.	.
		313	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	A	A	H	L	N	G	D	V	D	M	Y	E	V	V	K	A	I	V	E	E	E
Query Conservation
Alig confidence				.	.	.
Template Conservation				.	.	.
Template Sequence		V	V	.	.	.	T	F	D	D	E	L	R	E	I	A	L	E	I	V	R	N	D
Template Known Secondary structure				.	.	.		S														T	T
Template Predicted Secondary structure				.	.	.
Template SS confidence
		297	.				.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions