Job Description P24215 Confidence 99.88% Date Thu Jan 5 11:41:18 GMT 2012 Rank 10 Aligned Residues 228 % Identity 14% Template c3obeB_ PDB info PDB header:isomerase Chain: B: PDB Molecule:sugar phosphate isomerase/epimerase; PDBTitle: crystal structure of a sugar phosphate isomerase/epimerase (bdi_3400)2 from parabacteroides distasonis atcc 8503 at 1.70 a resolution Resolution 1.70 Å

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		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.						40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																											.	.	.	.	.
Query SS confidence																											.	.	.	.	.
Query Sequence		S	L	A	D	V	R	Q	A	G	A	T	G	V	V	T	A	L	H	H	I	P	N	G	E	V	.	.	.	.	.	W	S	V	E	E	I	L	K	R	K	A	I	I	E	D	A	G	L	V	W	S	V	V	E	S	V	P	I	H	E	D	I	K	T	H	T	G	N	Y	E	Q	W	I	A	N	Y	Q	Q	T	L
Query Conservation																											.	.	.	.	.
Alig confidence																											.	.	.	.	.																												.	.
Template Conservation																																																											.	.
Template Sequence		G	L	N	R	L	A	K	A	G	Y	T	D	L	E	I	F	G	Y	R	E	D	T	G	K	F	G	D	Y	N	N	T	T	F	I	A	S	K	D	Y	K	K	X	V	D	D	A	G	L	R	I	S	S	S	H	L	T	P	.	.	S	L	R	E	Y	T	K	E	N	X	P	K	F	D	E	F	W	K	K	A	T
Template Known Secondary structure									T	T									B		T	T	T	S		B									B												T	T							B				.	.	S						G	G	G
Template Predicted Secondary structure																																																											.	.
Template SS confidence
		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.			.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	N	L	A	Q	C	G	I	R	T	V	C	Y	N	F	M	P	V	L	D	W	T	R	T	D	L	E	Y	V	L	P	D	G	S	K	A	L	R	F	D	Q	I	E	F	A	A	F	E	M	H	I	L	K	R	P	G	A	E	A	D	Y	T	E	E	E	I	A	Q	A	A	E	R	F	A	T	M	S	D	E	D
Query Conservation
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	I	H	A	E	L	G	V	S	C	X	V	Q	P	S	L	P	R	I	E	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure								T		S											S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.				240	.	.	.	.
Predicted Secondary structure																																																																								.	.	.						.	.
Query SS confidence																																																																								.	.	.						.	.
Query Sequence		K	A	R	L	T	R	N	I	I	A	G	L	P	G	A	E	E	G	Y	T	L	D	Q	F	R	K	H	L	E	L	Y	K	D	I	D	K	A	K	L	R	E	N	F	A	V	F	L	K	A	I	I	P	V	A	E	E	V	G	V	R	M	A	V	H	P	D	D	P	P	R	.	.	.	P	I	L	G	L	.	.
Query Conservation																																																																								.	.	.						.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.						.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	D	D	A	K	V	V	S	E	I	F	N	R	A	G	E	I	T	K	K	A	G	I	L	W	G	Y	H	N	H	S	N	E	F	K	R	V	L	K	A	G	E	K	P
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				T	T	T									S	G	G	G	S					T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																																						167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
								245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	P	R	I	V	S	T	I	E	D	M	Q	W	M	V	D	T	V	N	S	M	A	N	G	F	T	M	C	T	G	S	Y	G	V	R	A	D	N	D	L	V	D	M	I	K	Q	F	G	P	R	I	Y	F	T	H	L	R	S	T	M	R	E	D	N	P	K	T	F	H	E	A	A	H	L	N
Query Conservation		.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.																																			.																							.	.	.	.	.	.	.	.	.	.
Template Conservation																																										.																							.	.	.	.	.	.	.	.	.	.
Template Sequence		E	Q	N	P	N	P	W	A	P	P	K	G	T	Y	I	E	E	L	F	L	K	N	T	D	P	D	K	V	X	F	E	L	D	V	Y	W	A	V	X	G	.	Q	Q	D	P	V	E	W	X	E	N	Y	P	N	R	F	K	L	L	H	I	K	D	.	.	.	.	.	.	.	.	.	.	R	W	I	I	G	D	S
Template Known Secondary structure			S	S			S	S	S				S											S		T	T	T													T	.	T										S	T	T	T									.	.	.	.	.	.	.	.	.	.	S	S	S	T	T		S
Template Predicted Secondary structure																																										.																							.	.	.	.	.	.	.	.	.	.
Template SS confidence
		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250		.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.											.	.	.	.	.	.	.
		319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.		.	340	.	.	.	.	.	.	.	.	.	350
Predicted Secondary structure																						.
Query SS confidence																						.
Query Sequence		G	D	V	D	M	Y	E	V	V	K	A	I	V	E	E	E	H	R	R	K	.	A	E	G	K	E	D	L	I	P	M	R	P
Query Conservation																						.
Alig confidence																						.
Template Conservation
Template Sequence		G	X	X	N	F	P	N	I	F	K	K	A	Y	E	I	G	I	L	G	Y	Y	V	E	L	E	G	D	K	K	G	R	T	Q
Template Known Secondary structure		S	S														T												T	T
Template Predicted Secondary structure
Template SS confidence
		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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