Return to main results Retrieve Phyre Job Id

Job DescriptionP24215
Confidence32.82%DateThu Jan 5 11:41:18 GMT 2012
Rank141Aligned Residues79
% Identity24%Templatec3eooL_
PDB info PDB header:lyaseChain: L: PDB Molecule:methylisocitrate lyase; PDBTitle: 2.9a crystal structure of methyl-isocitrate lyase from2 burkholderia pseudomallei
Resolution2.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   12.......20.........30 .........40.........50.........60.........70.........80....
Predicted Secondary structure 









.......





















Query SS confidence 


















. . . . . . .





















































Query Sequence  DPVSLADVRQAGATGVVTA. . . . . . . LHHIPNGEVWSVEEILKRKAIIEDAGLVWSVVESVPIHEDIKTHTGNYEQWIAN
Query Conservation 
 
 
  


 


 

  .......
   
 
  
  
 
   
  

  

   



 

   



   

  

 
Alig confidence 


















.......

























.......














....

Template Conservation 

 

     


 

  

   

  

 

    
  
       
    .......  




 
 


  ....  
Template Sequence  TAYAAKMAEAVGFKAVYLSGGGVAANSLGIPDLGISTMDDVLVDANRITNAT. . . . . . . NLPLLVDIDTGWGGA. . . . FN
Template Known Secondary structure  STT
S

S
SSS



.......
S

TT
SSS....
Template Predicted Secondary structure 

















.......








....
Template SS confidence 















































































   30.........40.........50.........60.........70.........80. ........90...... ..
 
   85....90.........100.
Predicted Secondary structure 



Query SS confidence 
















Query Sequence  YQQTLRNLAQCGIRTVC
Query Conservation      




 


  

Alig confidence 
















Template Conservation 
   
     


 

 
Template Sequence  IARTIRSFIKAGVGAVH
Template Known Secondary structure  TT
S
Template Predicted Secondary structure 



Template SS confidence 
















   99100.........110.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions