Job Description P24215 Confidence 62.86% Date Thu Jan 5 11:41:18 GMT 2012 Rank 69 Aligned Residues 188 % Identity 16% Template c3eb2A_ PDB info PDB header:lyase Chain: A: PDB Molecule:putative dihydrodipicolinate synthetase; PDBTitle: crystal structure of dihydrodipicolinate synthase from2 rhodopseudomonas palustris at 2.0a resolution Resolution 2.04 Å

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		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40			.	.	.	.	.	.	.	.	.	50	.	.	.	.	.					.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
Predicted Secondary structure																											.	.																.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																											.	.																.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	A	D	V	R	Q	A	G	A	T	G	V	V	T	A	L	H	H	I	P	N	G	E	V	W	.	.	S	V	E	E	I	L	K	R	K	A	I	I	E	D	A	.	.	.	.	G	L	V	W	S	V	V	E	S	V	P	I	H	E	D	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																											.	.																.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.							.	.																.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.	.	.
Template Sequence		C	D	D	L	I	Q	A	G	V	H	G	L	T	P	L	G	.	.	.	S	T	G	E	F	A	Y	L	G	T	A	Q	R	E	A	V	V	R	A	T	I	E	A	A	Q	R	R	V	P	V	V	A	G	V	A	S	T	S	V	A	D	A	V	A	Q	A	K	L	Y	E	K	L	G	A	D	G	I	L	A	I	L
Template Known Secondary structure								T	T		S		B	B	T	T	S	.	.	.	G	G	G	T	G	G	G																		T	T	S	S		B							S	S															T		S
Template Predicted Secondary structure																		.	.	.
Template SS confidence
		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.				.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
			72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.		.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.																																																																			.
Query SS confidence		.																																																																			.
Query Sequence		.	K	T	H	T	G	N	Y	E	Q	W	I	A	N	Y	Q	Q	T	L	R	N	L	A	Q	C	G	I	R	T	V	C	Y	N	F	M	P	V	L	D	W	T	R	T	D	L	E	Y	V	L	P	D	G	S	K	A	L	R	F	D	Q	I	E	F	A	A	F	E	.	M	H	I	L	K	R	P	G	A	E	A	D
Query Conservation		.																																																																			.
Alig confidence		.																						.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.																					.
Template Conservation																								.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	A	Y	F	P	L	K	D	A	Q	I	E	S	Y	F	R	A	I	A	D	A	V	.	.	.	E	I	P	V	V	I	Y	T	N	.	.	.	.	.	.	.	.	.	.	.	.	.	P	Q	F	Q	R	S	D	L	T	L	D	V	I	A	R	L	A	E	H	P	R	I	R	Y	I	K	D	A	S	T	N	T	G
Template Known Secondary structure				S	S																			.	.	.	S	S								.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	T		S	S												T	S	T	T								S	S
Template Predicted Secondary structure																								.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.				130	.	.	.	.	.	.	.	.														.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	T	E	E	E	I	A	Q	A	A	E	R	F	A	T	M	S	D	E	D	K	A	R	L	T	R	N	I	I	A	G	L	P	G	A	E	E	G	Y	T	L	D	Q	F	R	K	H	L	E	L	Y	K	D	I	D	K	A	K	L	R	E	N	F	A	V	F	L	K	A	I	I	P	V	A	E
Query Conservation
Alig confidence																							.																																					.
Template Conservation																							.																																					.
Template Sequence		R	L	L	S	I	I	N	R	C	G	D	A	L	Q	V	F	S	A	S	A	H	.	I	P	A	A	V	M	L	I	G	G	V	G	W	M	A	G	P	A	C	I	A	P	R	Q	S	V	A	L	Y	E	L	C	K	A	Q	R	.	W	D	E	A	L	M	L	Q	R	K	L	W	R	V	N	E
Template Known Secondary structure											G	G	G	S						T	T	S	.								T	T							G	G	G	G	T														T	T		.												T
Template Predicted Secondary structure																							.																																					.
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.		.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.		.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions