Job Description P24215 Confidence 99.89% Date Thu Jan 5 11:41:18 GMT 2012 Rank 8 Aligned Residues 233 % Identity 17% Template c3cnyA_ PDB info PDB header:biosynthetic protein Chain: A: PDB Molecule:inositol catabolism protein iole; PDBTitle: crystal structure of a putative inositol catabolism protein iole2 (iole, lp_3607) from lactobacillus plantarum wcfs1 at 1.85 a3 resolution Resolution 1.85 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	D	V	R	Q	A	G	A	T	G	V	V	T	A	L	H	H	I	P	N	G	E	V	W	S	V	E	E	I	L	K	R	K	A	I	I	E	D	A	G	L	V	W	S	V	V	E	S	V	P	I	H	E	D	I	K	T	H	T	G	N	Y	E	Q	W	I	A	N	Y	Q	Q	T	L	R	N	L	A	Q	C
Query Conservation
Alig confidence														.	.	.	.	.	.	.								.	.																												.	.	.	.	.
Template Conservation														.	.	.	.	.	.	.								.	.																												.	.	.	.	.
Template Sequence		L	S	D	I	V	V	A	G	F	Q	G	T	.	.	.	.	.	.	.	E	V	G	G	F	F	P	.	.	G	P	E	K	L	N	Y	E	L	K	L	R	N	L	E	I	A	G	Q	W	F	S	S	Y	I	I	R	.	.	.	.	.	D	G	I	E	K	A	S	E	A	F	E	K	H	C	Q	Y	L	K	A	I
Template Known Secondary structure									T					.	.	.	.	.	.	.				T	T			.	.												T	T															.	.	.	.	.																				T
Template Predicted Secondary structure														.	.	.	.	.	.	.								.	.																												.	.	.	.	.
Template SS confidence
		36	.	.	.	40	.	.	.	.	.	.	.								.	.	50	.	.	.	.			.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.						.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	I	R	T	V	C	Y	N	F	M	P	V	L	D	W	T	R	T	D	L	E	Y	V	L	P	D	G	S	K	A	L	R	F	D	Q	I	E	F	A	A	F	E	M	H	I	L	K	R	P	G	A	E	A	D	Y	T	E	E	E	I	A	Q	A	A	E	R	F	A	T	M	S	D	E	D	K	A	R	L	T	R
Query Conservation
Alig confidence							.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation							.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	A	P	V	A	.	.	V	V	S	E	Q	T	Y	T	I	Q	R	S	D	T	A	N	I	F	K	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		T					.	.						T	T			T	T		S	S			T	T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure							.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		102	.	.	.	.			.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	I	I	A	G	L	P	G	A	E	E	G	Y	T	L	D	Q	F	R	K	H	L	E	L	Y	K	D	I	D	K	A	K	L	R	E	N	F	A	V	F	L	K	A	I	I	P	V	A	E	E	V	G	V	R	M	A	V	H	P	D	D	P	P	R	P	I	L	G	L	P	R	I	V	S	T	I	E	D	M	Q
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	P	Y	F	T	D	K	E	W	D	E	V	C	K	G	L	N	H	Y	G	E	I	A	A	K	Y	G	L	K	V	A	Y	H	H	H	.	.	.	.	.	.	.	.	X	G	T	G	I	Q	T	K	E	E	T	D
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										T	T									.	.	.	.	.	.	.	.	T	T	S	S	S		S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.
Template SS confidence
																											127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.									.	.	.	.	.	.	.	.	170	.	.	.
		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.														.	.	.	.	.	.	.	320	.	.
Predicted Secondary structure																																																											.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																											.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		W	M	V	D	T	V	N	S	M	A	N	G	F	T	M	C	T	G	S	Y	G	V	R	A	D	N	D	L	V	D	M	I	K	Q	F	G	P	R	I	Y	F	T	H	L	R	S	T	M	R	E	D	N	P	K	T	F	H	.	.	.	.	.	.	.	.	.	.	.	.	.	E	A	A	H	L	N	G	D	V	D
Query Conservation																																																											.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																									.																																		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																									.
Template Sequence		R	L	X	A	N	T	D	P	K	L	V	G	L	L	Y	D	T	G	H	I	A	V	S	.	D	G	D	Y	X	A	L	L	N	A	H	I	D	R	V	V	H	V	H	F	K	D	V	R	R	S	K	E	E	E	C	R	A	K	G	L	T	F	Q	G	S	F	L	N	G	X	F	T	V	P	G	D	G	D	L	D
Template Known Secondary structure						T	S		T	T	T														.		S		S								G	G	G																					T									T	T					T	T	T	S	S
Template Predicted Secondary structure																									.
Template SS confidence
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.		.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
		323	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	Y	E	V	V	K	A	I	V	E	E	E	H	R	R	K	A	E	G	K	E	D	L	I	P	M	R	P	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	K	P	V	Y	D	K	L	I	A	N	N	Y	K	G	W	I	V	V	E	A	E	Q	D	P	S	K	A	N
Template Known Secondary structure												T	T													T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions