Job Description P24215 Confidence 20.42% Date Thu Jan 5 11:41:18 GMT 2012 Rank 228 Aligned Residues 191 % Identity 19% Template c2hmcA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: the crystal structure of dihydrodipicolinate synthase dapa from2 agrobacterium tumefaciens Resolution 1.90 Å

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		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40			.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.		.	.	.	.	.	.	.	.	70	.																				.	.
Predicted Secondary structure																											.	.																						.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																											.	.																						.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	A	D	V	R	Q	A	G	A	T	G	V	V	T	A	L	H	H	I	P	N	G	E	V	W	.	.	S	V	E	E	I	L	K	R	K	A	I	I	E	D	A	G	L	V	W	S	V	.	V	E	S	V	P	I	H	E	D	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	T
Query Conservation																											.	.																						.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.							.	.																						.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.	.	.
Template Sequence		G	K	E	L	I	A	D	G	X	S	A	V	V	Y	C	G	.	.	.	S	X	G	D	W	P	L	L	T	D	E	Q	R	X	E	G	V	E	R	L	V	K	A	G	I	P	V	I	V	G	T	G	A	V	N	T	A	S	A	V	A	H	A	V	H	A	Q	K	V	G	A	K	G	L	X	V	I	P	R	V	L
Template Known Secondary structure								T	T							S	S	.	.	.	G	G	G	T	G	G	G	S															T	T										S	S															T		S									S
Template Predicted Secondary structure																		.	.	.
Template SS confidence
		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.				.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
		74	.	.	.	.	.	80	.	.	.		.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.		.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure												.																																																							.														.
Query SS confidence												.																																																							.														.
Query Sequence		H	T	G	N	Y	E	Q	W	I	A	.	N	Y	Q	Q	T	L	R	N	L	A	Q	C	G	I	R	T	V	C	Y	N	F	M	P	V	L	D	W	T	R	T	D	L	E	Y	V	L	P	D	G	S	K	A	L	R	F	D	Q	I	E	F	A	A	F	E	.	M	H	I	L	K	R	P	G	A	E	A	D	Y	.
Query Conservation												.																																																							.														.
Alig confidence												.									.	.												.	.	.	.	.	.	.	.	.	.	.	.	.																					.														.
Template Conservation																					.	.												.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	R	G	S	V	I	A	A	Q	K	A	H	F	K	A	I	L	S	A	.	.	A	P	E	I	P	A	V	I	Y	N	S	.	.	.	.	.	.	.	.	.	.	.	.	.	P	Y	Y	G	F	A	T	R	A	D	L	F	F	A	L	R	A	E	H	K	N	L	V	G	F	K	E	F	G	G	P	A	D	X	R
Template Known Secondary structure		S	S	T	T																.	.	S	T	T	S							B	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	G	T	B															T	T								S
Template Predicted Secondary structure																					.	.												.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.			.	.	130	.	.	.	.	.	.	.	.														.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
			151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.						200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure		.																																																		.	.	.	.	.
Query SS confidence		.																																																		.	.	.	.	.
Query Sequence		.	T	E	E	E	I	A	Q	A	A	E	R	F	A	T	M	S	D	E	D	K	A	R	L	T	R	N	I	I	A	G	L	P	G	A	E	E	G	Y	T	L	D	Q	F	R	K	H	L	E	L	.	.	.	.	.	Y	K	D	I	D	K	A	K	L	R	E	N	F	A	V	F	L	K	A	I	I	P	V	A	E
Query Conservation		.																																																		.	.	.	.	.
Alig confidence		.																																																		.	.	.	.	.
Template Conservation
Template Sequence		Y	A	A	E	N	I	T	S	R	D	D	E	V	T	L	X	I	G	V	D	T	A	V	V	H	G	F	V	N	C	G	A	T	G	A	I	T	G	I	G	N	V	L	P	K	E	V	I	H	L	C	K	L	S	Q	A	A	A	K	G	D	A	D	A	R	A	R	A	L	E	L	E	Q	A	L	A	V	L	S	S
Template Known Secondary structure							T	S		S	S	S	S							S	G	G	G								S								S	G	G	G	T	S															T	T	T															T
Template Predicted Secondary structure
Template SS confidence
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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