Return to main results Retrieve Phyre Job Id

Job DescriptionP24215
Confidence47.77%DateThu Jan 5 11:41:18 GMT 2012
Rank84Aligned Residues83
% Identity17%Templatec2ehhE_
PDB info PDB header:lyaseChain: E: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: crystal structure of dihydrodipicolinate synthase from2 aquifex aeolicus
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   16...20.........30.........40 .........50..... ....60.........70.
Predicted Secondary structure 















..

....





..................
Query SS confidence 
























. .














. . . .















. . . . . . . . . . . . . . . . . .
Query Sequence  LADVRQAGATGVVTALHHIPNGEVW. . SVEEILKRKAIIEDA. . . . GLVWSVVESVPIHEDI. . . . . . . . . . . . . . . . . .
Query Conservation 
  


 


 

  
   
 
  
..  
 
   
  

  ....

   



 

   
..................
Alig confidence 















...





..














....















..................
Template Conservation     
   

 

   
...



   

 


  
             

 

   
    
  
  
   


 
   
Template Sequence  IEFHVDNGTDAILVCG. . . TTGESPTLTFEEHEKVIEFAVKRAAGRIKVIAGTGGNATHEAVHLTAHAKEVGADGALVVV
Template Known Secondary structure  TTT
SSS...TTTTGGGS
TTSS


S
TT
S
Template Predicted Secondary structure 





...




















Template SS confidence 















































































   27..30.........40.. .......50.........60.........70.........80.........90.........100...
 
   72.......80.........90.........100....
Predicted Secondary structure  .









Query SS confidence  .
































Query Sequence  . KTHTGNYEQWIANYQQTLRNLAQCGIRTVCYNF
Query Conservation  .


   

  

     




 


  




Alig confidence  .




















...








Template Conservation 
         
      
    ...  




  
Template Sequence  PYYNKPTQRGLYEHFKTVAQEV. . . DIPIIIYNI
Template Known Secondary structure 

SS



...
S

Template Predicted Secondary structure 







...



Template SS confidence 

































   104.....110.........120..... ....130....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions