Job Description P09151 Confidence 26.93% Date Thu Jan 5 11:01:59 GMT 2012 Rank 459 Aligned Residues 217 % Identity 17% Template d1umya_ SCOP info TIM beta/alpha-barrel Homocysteine S-methyltransferase Homocysteine S-methyltransferase Resolution 2.5

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		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.							.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.												.	.	80	.	.	.	.	.	.
Predicted Secondary structure																															.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																															.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	V	K	E	K	L	Q	I	A	L	A	L	E	R	M	G	V	D	V	M	E	V	G	F	P	V	S	S	P	.	.	.	.	.	.	G	D	F	E	S	V	Q	T	I	A	R	Q	V	K	N	S	R	V	C	A	L	A	R	C	V	.	.	.	.	.	.	.	.	.	.	.	E	K	D	I	D	V	A	A	E
Query Conservation																															.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.
Alig confidence																															.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		H	P	E	A	V	R	Q	L	H	R	E	F	L	R	A	G	S	N	V	M	Q	T	F	T	F	Y	A	S	S	G	Q	K	V	N	E	A	A	C	D	I	A	R	Q	V	A	D	E	G	D	A	L	V	A	G	G	V	S	Q	T	P	S	Y	L	S	C	K	S	E	T	E	V	K	K	I	F	H	Q	Q	L	E
Template Known Secondary structure																	T																															T	T	T															T	T
Template Predicted Secondary structure
Template SS confidence
		52	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.			.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure																																																		.	.
Query SS confidence																																																		.	.
Query Sequence		S	L	K	V	A	E	A	F	R	I	H	T	F	I	A	T	S	P	M	H	I	A	T	K	L	R	S	T	L	D	E	V	I	E	R	A	I	Y	M	V	K	R	A	R	N	Y	T	D	.	.	D	V	E	F	S	C	E	D	A	G	R	T	P	I	A	D	L	A	R	V	V	E	A	A	I	N	A	G	A	T
Query Conservation																																																		.	.
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.
Template Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	F	M	K	K	N	V	D	F	L	I	A	E	Y	F	E	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	E	E	A	V	W	A	V	E	A	L	K	T	S	G	K	P	I	A	A	T	M	C	I	G	P	E	G	D	L	H	G	V	S	P	G	E	C	A	V	R	L	V	K	A	G	A	A
Template Known Secondary structure						T	T		S								S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													T	T		S										T	T			T	T														T	T		S
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.																.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.		.	.	.	.	.	.	.	.	200	.	.	.	.					.	.	.	.																							.	210	.	.	.	.	.	.	.
Predicted Secondary structure																													.														.	.	.	.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																													.														.	.	.	.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	I	N	I	P	D	T	V	G	Y	T	M	P	F	E	F	A	G	I	I	S	G	L	Y	E	R	V	.	P	N	I	D	K	A	I	I	S	V	H	T	H	.	.	.	.	D	D	L	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	A	V	G	N	S	L	A	A
Query Conservation																													.														.	.	.	.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.																.														.	.	.	.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.	.	.
Template Sequence		I	V	G	V	N	C	H	F	D	.	.	.	P	S	T	S	L	Q	T	I	K	L	M	K	E	G	L	E	A	A	R	L	K	A	Y	L	M	S	Q	P	L	A	Y	H	T	P	D	C	G	K	Q	G	F	I	D	L	P	E	F	P	F	G	L	E	P	R	V	A	T	R	W	D	I	Q	K	Y	A	R	E	A
Template Known Secondary structure							S	S	S		.	.	.																	T	T	T											S	B			T	T			S	S	T	G	G	G	S	T	T	T	T	T	S		G	G	G	B
Template Predicted Secondary structure											.	.	.
Template SS confidence
		212	.	.	.	.	.	.	.	220				.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	H	A	G	A	R	Q	V	E	G	A	M	N	G	I	G	E	R	A	G	N	C	S	L	E	E	V	I	M	A	I	K	V	R	K	D	I	L	N	V	H	T	A	I	N	H	Q	E	I	W	R	T	S	Q	L	V	S	Q	I	C	N	M	P	I	P	A	N	K	A	I	V
Query Conservation
Alig confidence										.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation										.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	N	L	G	V	R	Y	I	.	.	.	.	.	.	.	G	G	C	C	G	F	E	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	H	I	R	A	I	A	E	E	L	A	P	E	R	G	F	L	P	P	A	S	E	K	H	G
Template Known Secondary structure					T					.	.	.	.	.	.	.				T	T				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										T					T				G	G	G	G	G
Template Predicted Secondary structure										.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		289	290	.	.	.	.	.	.								.	.	.	300	.	.	.	.																								.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions