|   |
24 | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | V | K | E | K | L | Q | I | A | L | A | L | E | R | M | G | V | D | V | M | E | V | G | F | P | V | S | S | P | G | D | F | E | S | V | Q | T | I | A | R | Q | V | K | N | S | R | V | C | A | L | A | R | C | V | E | K | D | I | D | V | A | A | E | S | L | K | V | A | E | A | F | R | I | H | T | F | I | A | T | S |
Query Conservation |   |
|   |
|   |
|
|   |
|
|   |   |
|   |   |   |
|
|   |   |
|
|
|
|   |
|   |
|
|   |   |
|   |
|   |
|   |   |
|   |   |   |   |   |   |   |   |
|   |
|
|   |
|   |   |   |   |
|
|
|   |
|   |
|
|
|   |   |   |
|   |   |   |
|   |
|   |   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
|
|   |   |   |   |   |   | . |   |   |   |
|
|   |
|
|
|
|   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |
|   |   |
|   |
|   |   | . |
|
|   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |
|   |
|
|   |   |   |   |
Template Sequence |   |
T | M | D | S | A | Y | E | T | T | R | L | I | . |
A | E | E | V | D | I | I | E | V | G | T | I | L | C | V | G | E | G | V | R | A | V | R | D | L | K | A | L | Y | P | H | K | I | V | L | A | D | A | K | I | A | . |
D | A | G | K | I | L | S | R | M | C | F | E | A | N | A | D | W | V | T | V | I | C | C | A | D |
Template Known Secondary structure |   |
S |  |  |  |  |  |  |  |  |  |  |  | . | G | G | G |
| S |  |  |  |  |
|  |  |  |  |  |  |  |
| T |  |  |  |  |  |  |  |  |  |
| T | T | S |  |  |  |  |  |  |  |  |
| . | S |
|  |  |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |  |  | T | T | S |
|
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  | . |
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
| . |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
14 | . | . | . | . | . | 20 | . | . | . | . | . | |
. | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | |
. | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . |
  |
  |   |
104 | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | |
|
|
|
|
. | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
| . | . | . | . | . |
|
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
Query Sequence |   |
P | M | H | I | A | T | K | L | R | S | T | L | D | E | V | I | E | R | A | I | Y | M | V | K | R | A | R | N | Y | T | D | D | V | E | F | S | C | E | D | A | G | R | T | P | I | A | D | L | A | R | V | V | E | A | A | I | N | A | G | A | T | T | I | N | I | P | D | T | V | . |
. |
. |
. |
. |
G | Y | T | M | P | F |
Query Conservation |   |
|   |
|   |   |   |   |   |   |   |
|   |
|
|   |   |   |   |   |   |   |   |
|   |   |
|
|   |   |
|   |   |
|   |   |   |   |
|
|   |   |
|   |   |   |
|   |
|   |   |   |   |   |   |
|   |   |   |
|
|
|   |
|   |
|   |
|
|   | . | . | . | . | . |
|   |   |   |
|   |
Alig confidence |   |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
Template Conservation |   |
  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
Template Sequence |   |
I | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
N | T | A | K | G | A | L | D | V | A | K | E | F | N | G | D | V | Q | I | E | L | T | G | Y | W | T | W | . |
. |
. |
. |
. |
. |
E | Q | A | Q | Q | W | R | D | A | G | I | G | Q | V | V | Y | H | R | S | R | D | A | Q | A | A | G | V | A | W | G | E |
Template Known Secondary structure |   |
 | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  |
| S |
|
|
|  | . | . | . | . | . | . |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |
|
|  |  |  |  |  | T | T |
|
|
|
|  |
Template Predicted Secondary structure |   |
 | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|  | . | . | . | . | . | . |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
92 | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 |
  |
  |   |
179 | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | F | A | G | I | I | S | G | L | Y | E | R | V | P | N | I | D | K | A | I | I | S | V | H | T | H | D | D | L | G | L | A | V | G | N | S | L | A | A | V | H | A | G | A | R | Q | V |
Query Conservation |   |
  |
|   |   |
|
|   |   |
|   |   |   |
|
|   |   |   |   |
|   |
|   |   |
|   |
|
|
|   |
|
|
|
|
|
|
|
|
|
|
|   |
|
|
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |
|
|   |   |   |   |   | . | . | . | . | . |   |   |   |
|   |   | . | . | . | . |   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |
|
Template Sequence |   |
A | D | I | T | A | I | K | R | L | S | D | M | . |
. |
. |
. |
. |
G | F | K | V | T | V | . |
. |
. |
. |
T | G | G | L | A | L | E | D | L | P | L | F | K | G | I | P | I | H | V | F |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  | T | . | . | . | . | . | T |
|  |  |  |  | . | . | . | . |  | S | S |
|
| G | G | G | G | G | G | G | T | T | S |
|
| S |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
| . | . | . | . | . |
|
|
|  |  |
| . | . | . | . |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
151 | . | . | . | . | . | . | . | . | 160 | . | . | |
|
|
|
|
. | . | . | . | . | . | |
|
|
|
. | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . |
  |