|   |
30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | |
|
|
|
|
|
. | . | 80 | . | . | . | . | . | . | . | . | . | 90 |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
| . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | I | A | L | A | L | E | R | M | G | V | D | V | M | E | V | G | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
F | P | V | S | S | P | G | D | F | E | S | V | Q | T | I | A | R | Q | V | K | N | S | R | V | C | A | L | A | R | C | V | . |
. |
. |
. |
. |
. |
E | K | D | I | D | V | A | A | E | S | L | K | V |
Query Conservation |   |
  |
|
|   |   |
|   |   |   |
|
|   |   |
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |   |
|   |
|
|   |   |
|   |
|   |
|   |   |
|   |   |   |   |   |   |   |   |
|   |
|
|   |
|   |   | . | . | . | . | . | . |   |   |
|
|
|   |
|   |
|
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
| . |
|
|
|
Template Conservation |   |
  |   |
|   |   |   |
|   |
|
|
|
|   |
|
|
|
|
|
|
|
|
|
|   |   |
|   |   |   |
|   |   |
|
|
|
|   |
|
|   |
|   |   |
|
|   |
|
|   |   |   |
|   |
|
|
|
|
|
|
|   |
|
|   |   |
|   |
|   |
|   |   |   |
|   |
| . |
|   |
|
Template Sequence |   |
S | F | A | A | L | X | D | D | A | G | V | E | X | L | L | V | G | D | S | L | G | X | A | V | Q | G | R | K | S | T | L | P | V | S | L | R | D | X | C | Y | H | T | E | C | V | A | R | G | A | K | N | A | X | I | V | S | D | L | P | F | G | A | Y | Q | Q | S | K | E | Q | A | F | A | A | A | A | E | . |
L | X | A |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |
| T | T |  |  |  |  | T | T |
|
| S | S | S | T | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| S | S | S |  |  |  |  |  |
|
| T | T | S | S | S | S |
|  |  |  |  |  |  |  |  |  |  | . |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  | . |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
26 | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | |
. | . | . |
  |
  |   |
91 | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | |
|
|
. | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
| . | . | . |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | E | A | F | R | I | H | T | F | I | A | T | S | P | M | H | I | A | T | K | L | R | S | T | L | D | E | V | I | E | R | A | I | Y | M | V | K | R | A | R | N | Y | T | D | D | V | E | F | S | C | . |
. |
. |
E | D | A | G | R | T | P | I | A | D | L | A | R | V | V | E | A | A | I | N | A | G | A | T | T | I | N |
Query Conservation |   |
  |
|   |   |   |
|   |
|   |   |   |   |
|
|   |
|   |   |   |   |   |   |   |
|   |
|
|   |   |   |   |   |   |   |   |
|   |   |
|
|   |   |
|   |   |
|   |   |   |   | . | . | . |
|
|   |   |
|   |   |   |
|   |
|   |   |   |   |   |   |
|   |   |   |
|
|
|   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|   |
|
|
|
|
|
|
|   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |
|   |   |
|   |   |   |
|
|
|
|   |
|
|
|
|
|
|
|
|
|   |   |   |   |
|   |   |
|   |   |
|
|   |   |
|
|
|
|
|
|
|
|
|
|
Template Sequence |   |
A | G | A | H | X | V | K | L | E | G | G | V | W | X | A | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
E | T | T | E | F | L | Q | X | R | G | I | P | V | C | A | H | I | G | L | T | P | Q | S | V | F | A | K | A | Q | A | L | L | N | D | A | K | A | H | D | D | A | G | A | A | V | V | L |
Template Known Secondary structure |   |
T | T |
| S |  |  |  |  |  |
| S | G | G | G |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |  | S |
| G | G | G | T | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |
|
|
|
|
|  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
105 | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . |
  |
  |   |
168 | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | P | D | T | V | G | Y | T | M | P | F | E | F | A | G | I | I | S | G |
Query Conservation |   |
|   |
|
|   |
|   |   |   |
|   |   |
|   |   |
|
|   |   |
Alig confidence |   |
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
| . | . | . | . | . |   |
|
|   |   |
|
|   |   |
|
|   |
Template Sequence |   |
X | E | . |
. |
. |
. |
. |
C | V | L | A | E | L | A | K | K | V | T | E |
Template Known Secondary structure |   |
 |  | . | . | . | . | . | S |
|
|  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  | . | . | . | . | . |  |
|
|  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
178 | . | |
|
|
|
|
180 | . | . | . | . | . | . | . | . | . | 190 | . |
  |