Job Description P09151 Confidence 100.00% Date Thu Jan 5 11:01:59 GMT 2012 Rank 14 Aligned Residues 274 % Identity 23% Template d1nvma2 SCOP info TIM beta/alpha-barrel Aldolase HMGL-like Resolution 1.70

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.												50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																			.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																			.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	S	Q	Q	V	I	I	F	D	T	T	L	R	D	G	E	Q	A	L	Q	A	S	L	S	V	K	E	K	L	Q	I	A	L	A	L	E	R	M	G	V	D	V	M	E	V	G	F	P	V	.	.	.	.	.	.	.	.	.	.	.	S	S	P	G	D	F	E	S	V	Q	T	I	A	R	Q	V	K	N	S	R
Query Conservation																																																			.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																			.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	S	K	K	L	Y	I	S	D	V	T	L	R	D	G	S	H	A	I	R	H	Q	Y	T	L	D	D	V	R	A	I	A	R	A	L	D	K	A	K	V	D	S	I	E	V	A	H	G	D	G	L	Q	G	S	S	F	N	Y	G	F	G	R	H	T	D	L	E	Y	I	E	A	V	A	G	E	I	S	H	A	Q
Template Known Secondary structure					B							T	T	T						T	T	T																		T		S					S		T	T	S	T	T			B	T	T	T	B			S	S											T	T		S	S	S
Template Predicted Secondary structure
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	C	A	L	A	R	C	V	E	K	D	I	D	V	A	A	E	S	L	K	V	A	E	A	F	R	I	H	T	F	I	A	T	S	P	M	H	I	A	T	K	L	R	S	T	L	D	E	V	I	E	R	A	I	Y	M	V	K	R	A	R	N	Y	T	D	D	V	E	F	S	C	E	D	A	G	R	T	P	I	A
Query Conservation
Alig confidence																.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	A	T	L	L	L	P	G	I	G	S	V	H	D	.	L	K	N	A	Y	Q	A	G	A	R	V	V	R	V	A	T	H	C	T	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	D	V	S	K	Q	H	I	E	Y	A	R	N	L	G	M	D	T	V	G	F	L	M	M	S	H	M	I	P	A	E
Template Known Secondary structure								B	T	T	B					.								T										T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	G	G											T									S	T	T	S	S
Template Predicted Secondary structure																.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.		.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.															.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	L	A	R	V	V	E	A	A	I	N	A	G	A	T	T	I	N	I	P	D	T	V	G	Y	T	M	P	F	E	F	A	G	I	I	S	G	L	Y	E	R	V	P	N	I	D	K	A	I	I	S	V	H	T	H	D	D	L	G	L	A	V	G	N	S	L	A	A	V	H	A	G	A	R	Q	V	E	G	A	M
Query Conservation
Alig confidence																																														.	.
Template Conservation																																														.	.
Template Sequence		K	L	A	E	Q	G	K	L	M	E	S	Y	G	A	T	C	I	Y	M	A	D	S	G	G	A	M	S	M	N	D	I	R	D	R	M	R	A	F	K	A	V	L	K	P	.	.	E	T	Q	V	G	M	H	A	H	H	N	L	S	L	G	V	A	N	S	I	V	A	V	E	E	G	C	D	R	V	D	A	S	L
Template Known Secondary structure														T		S							T	T																			S		T	.	.	T	S							B		T	T	S												T	T							B	G
Template Predicted Secondary structure																																														.	.
Template SS confidence
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.			.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270		.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																											.
Query SS confidence																																											.
Query Sequence		N	G	I	G	E	R	A	G	N	C	S	L	E	E	V	I	M	A	I	K	V	R	K	D	I	L	N	V	H	T	A	I	N	H	Q	E	I	W	R	T	S	.	Q	L	V	S	Q	I	C	N	M	P	I	P	A	N	K	A	I	V	G	S	G	A	F	A	H	S	S	G	I
Query Conservation																																											.
Alig confidence																						.	.	.	.																		.																				.	.	.	.
Template Conservation																						.	.	.	.																																						.	.	.	.
Template Sequence		A	G	M	G	A	G	A	G	N	A	P	L	E	V	F	I	A	V	A	E	.	.	.	.	R	L	G	W	N	H	G	T	D	L	Y	T	L	M	D	A	A	D	D	I	V	R	P	L	Q	D	R	P	V	R	V	D	R	E	T	L	G	.	.	.	.	L	G	Y	A	G	V
Template Known Secondary structure		G	G		S	S	T	T		B		B										.	.	.	.			T		B			S												T	T	G	G	G		S	S			S								.	.	.	.					T
Template Predicted Secondary structure																						.	.	.	.																																						.	.	.	.
Template SS confidence
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.					.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.					.	.	.	.	.	290

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions