Job Description P09151 Confidence 95.34% Date Thu Jan 5 11:01:59 GMT 2012 Rank 67 Aligned Residues 202 % Identity 10% Template c3qxbB_ PDB info PDB header:isomerase Chain: B: PDB Molecule:putative xylose isomerase; PDBTitle: crystal structure of a putative xylose isomerase (yp_426450.1) from2 rhodospirillum rubrum atcc 11170 at 1.90 a resolution Resolution 1.90 Å

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		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.						.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.																						.	.	80	.	.	.	.
Predicted Secondary structure																									.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																									.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	A	L	A	L	E	R	M	G	V	D	V	M	E	V	G	F	P	V	S	S	P	G	.	.	.	.	.	D	F	E	S	V	Q	T	I	A	R	Q	V	K	N	S	R	V	C	A	L	A	R	C	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	K	D	I	D	V	A
Query Conservation																									.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																									.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	G	L	V	R	D	D	L	G	L	E	Y	V	Q	Y	T	Y	D	L	T	D	P	W	W	P	D	I	E	R	D	R	R	A	I	A	Y	A	K	A	F	R	K	A	G	L	T	I	E	S	T	F	G	G	L	A	S	Y	T	Y	N	H	F	L	A	P	T	L	E	L	Q	S	L	G	Y	Q	H	L	K	R	A
Template Known Secondary structure								T	T									T	T	T	S		T	T	S																			T	T														T	S		B	T	T		S	S
Template Predicted Secondary structure
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.				.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140					.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.																																	.	.	.	.
Query SS confidence																										.	.	.																																	.	.	.	.
Query Sequence		A	E	S	L	K	V	A	E	A	F	R	I	H	T	F	I	A	T	S	P	M	H	I	A	.	.	.	T	K	L	R	S	T	L	D	E	V	I	E	R	A	I	Y	M	V	K	R	A	R	N	Y	T	D	D	V	E	F	S	C	.	.	.	.	E	D	A	G	R	T	P	I	A	D	L	A	R	V	V	E	A
Query Conservation																										.	.	.																																	.	.	.	.
Alig confidence																										.	.	.																																	.	.	.	.
Template Conservation
Template Sequence		I	D	X	T	A	A	X	E	V	P	A	T	G	X	P	F	G	S	Y	S	A	A	D	A	L	N	P	A	R	R	E	E	I	Y	A	I	A	R	D	X	W	I	E	L	A	A	Y	A	K	R	Q	G	L	S	X	L	Y	V	E	P	V	P	L	A	T	E	F	P	S	S	A	A	D	A	A	R	L	X	A	D
Template Known Secondary structure								T	T		S							B	B							T																											T										S		T	T	B	S	S		S
Template Predicted Secondary structure
Template SS confidence
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.								.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure																					.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.	.	.
Query Sequence		A	I	N	A	G	A	T	T	I	N	I	P	D	T	V	G	Y	T	M	.	.	.	.	.	.	.	P	F	E	F	A	G	I	I	S	G	L	Y	E	R	V	P	N	I	D	K	A	I	I	S	V	H	T	H	D	D	L	G	L	A	V	G	N	S	L	A	A	V	H	A	G	A	R	Q	V	E	G	A	M	N
Query Conservation																					.	.	.	.	.	.	.
Alig confidence																					.	.	.	.	.	.	.																.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																											.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	D	G	R	T	E	I	P	V	R	L	L	V	D	W	G	H	A	L	F	E	P	L	F	G	P	E	A	D	X	D	H	W	X	D	L	C	Q	P	W	I	.	.	.	.	.	.	.	A	A	Y	H	I	Q	Q	T	D	G	Q	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	R	H	W	S
Template Known Secondary structure			T	T	T	S	S	S												T						G	G	G		S									G	G	G		.	.	.	.	.	.	.							B			S	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				B
Template Predicted Secondary structure																																											.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.								.	.	.	.	.	.	.	.	230	.	.	.																.	.	.	.	.
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	I	G	E	R	A	G	N	C	S	L	E	E	V	I	M	A	I	K	V	R	K	D	I	L	N	V
Query Conservation
Alig confidence						.	.																.
Template Conservation						.	.																.
Template Sequence		F	T	Q	P	.	.	G	V	V	T	P	Q	R	L	Q	D	F	W	D	K	Y	.	A	L	T	D	Q
Template Known Secondary structure		T	T	S		.	.	S	S													T	.	T		S	S
Template Predicted Secondary structure						.	.																.
Template SS confidence
		239	240	.	.			.	.	.	.	.	.	.	250	.	.	.	.	.	.	.		.	.	260	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions