|   |
143 | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | G | R | T | P | I | A | D | L | A | R | V | V | E | A | A | I | N | A | G | A | T | T | I | N | I | P | D | T | V | G | Y | T | M | P | F | E | F | A | G | I | I | S | G | L | Y | E | R | V | P | N | I | D | K | A | I | I | S | V | H | T | H | D | D | L | G | L | A | V | G | N | S | L | A | A | V | H | A | G | A |
Query Conservation |   |
  |   |
|   |   |   |
|   |
|   |   |   |   |   |   |
|   |   |   |
|
|
|   |
|   |
|   |
|
|   |
|   |   |   |
|   |   |
|   |   |
|
|   |   |
|   |   |   |
|
|   |   |   |   |
|   |
|   |   |
|   |
|
|
|   |
|
|
|
|
|
|
|
|
|
|
|   |
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |
|   | . | . |
|   |
|   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|
|   |   |   |
| . |   |   |
|   |
|
|
|
|   |   |
|   |   |   |   |
|
|   |   |   | . |   |   |
|
|   |   |   |
Template Sequence |   |
E | A | L | T | P | A | A | I | A | R | Q | A | E | A | A | V | D | R | Y | G | F | A | D | F | K | L | . |
. |
K | G | G | V | X | A | G | A | D | E | X | E | A | I | A | A | I | K | A | C | F | P | D | . |
A | R | A | T | L | D | P | N | G | A | W | S | L | D | E | A | V | A | L | C | . |
R | G | Q | G | H | L | L |
Template Known Secondary structure |   |
| B |
| S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  | . | . |  |
| S | S | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| T | T | . | S |  |  |  |  |  |
| T | T | B | B |
|  |  |  |  |  |  |  |  | . | T | T |
| T | T | T |
|
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  | . | . |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| . |
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  | . |  |  |
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
201 | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | |
|
. | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | |
250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | |
270 | . | . | . | . | . | . |
  |
  |   |
223 | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | |
. | . | . | . | . | . | . | . | 260 | . | . | |
. | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
| . |
|
|
|
|
|
|
|
|
|
|
| . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | Q | V | E | G | A | M | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
N | G | I | G | E | R | A | G | N | C | S | L | E | E | V | I | M | A | I | K | V | R | . |
K | D | I | L | N | V | H | T | A | I | N | . |
H | Q | E | I | W | R | T | S | Q | L | V | S | Q | I | C | N |
Query Conservation |   |
  |   |
|
|   |
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |
|
|
|
|
|
|
|
|
|   |
|
|   |
|
|   |   |
|   |   |   | . |   |   |   |   |
|   |   |
|   |
|
| . |
|   |   |
|   |   |
|
|   |   |
|   |   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
Template Conservation |   |
  |
|
|
|
|
|
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|
|
|
|   |
|
|   |   |   |   | . | . |   |   |   |   |   |   |
|
|   |   |   |
|   |
|
|   |
|   |
|   |   |   |
|
|
|
|   |   |   |
|
|
|   |
|
|   |   |   | . |   |
Template Sequence |   |
A | Y | A | E | D | P | C | G | P | E | G | G | Y | S | G | R | E | V | X | A | E | F | R | R | A | T | G | I | P | T | A | T | N | X | I | A | T | D | . |
. |
W | R | Q | X | D | H | A | V | R | L | Q | A | V | D | I | P | L | A | D | P | H | F | W | T | X | Q | G | S | V | R | L | A | Q | L | C | R | D | W | . |
G |
Template Known Secondary structure |   |
S |  |  |  | S |
| B |
|
| B | T | T | B |
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  | S | S | S |
|
| S | . | . |  |  |  |  |  |  |  |  |  |  | T |
|
| S |  |  | B |
|
|  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | T |
Template Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |
|
|
|
|
|
|
| . | . |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | . |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
277 | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | |
|
. | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | |
. |
  |
  |   |
279 | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | |
|
. | . | . | . | . | . | . | 350 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |  |  |
|
|  |  |  |
|
|
|
|
|  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  | . | . |  |
|
|
|
|
|
|  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | P | I | P | A | N | K | A | I | V | G | S | G | A | F | A | H | S | S | G | I | H | Q | D | G | V | L | K | N | R | E | N | Y | E | I | M | T | P | E | S | I | G | L | N | Q | I | Q | L | N | L | T | S | R | S | G | R | A | A | V | K | H | R | M | D | . |
. |
E | M | G | Y | K | E | S | E | Y | N | L | D | N | L |
Query Conservation |   |
  |   |   |   |   |   |   |
|
|
|
|   |   |
|
|   |
|   |
|
|
|
|   |
|
|
|   |
|   |   |   |   |
|
|   |   |   |
|   |   |
|
|   |   |   |   |   |   |   |
|   |   |   |
|
|   |   |   |
|   |   |   |
|   | . | . |   |   |
|   |   |   |   |   |   |   |   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |
|   |   | . | . |   |   |   |   |
|   |   |
|
|   |   |
|   |   |
|
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   | . |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|   |   |
|
|
|
|
|
|
|
|   |
|   |
|   |
|
|
Template Sequence |   |
L | T | W | G | S | H | S | N | . |
. |
N | H | F | D | V | S | L | A | X | F | T | H | A | A | A | A | A | P | G | T | I | T | A | I | D | T | H | W | I | W | Q | E | G | . |
D | A | R | L | T | R | E | P | L | K | I | V | G | G | Q | V | A | V | P | E | R | P | G | L | G | I | E | L | D | X | A | Q | V | E | A | A |
Template Known Secondary structure |   |
|
|
| B |
|
|
|
| . | . | S |
|
|  |  |  |  |  |  |  |  |  |  |  |  | T |
|
| S |
|
|
|
| B |
|
|
|  |  |  |  | B | T | . | T | B |
| S | B | S | S |
|
|
|  |  | T | T |  |  |  |
|
| S | S | S | B | T | S |
|
| B |
|  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |
|
|
| . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  | . |  |  |  |  |
|
|
|
|
|  |  |  |
|
|  |  |  |
|
|
|
|
|
|
|
|  |  |  |
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
354 | . | . | . | . | . | 360 | . | |
|
. | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | |
. | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 |
  |
  |   |
357 | . | . | 360 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
Query Sequence |   |
Y | D | A | F | L | K |
Query Conservation |   |
  |   |   |
|
|   |
Alig confidence |   |
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |
Template Sequence |   |
H | A | L | Y | K | E |
Template Known Secondary structure |   |
 |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
  |   |
431 | . | . | . | . | . |
  |