Job Description P09151 Confidence 87.87% Date Thu Jan 5 11:01:59 GMT 2012 Rank 193 Aligned Residues 187 % Identity 11% Template c3ngjC_ PDB info PDB header:lyase Chain: C: PDB Molecule:deoxyribose-phosphate aldolase; PDBTitle: crystal structure of a putative deoxyribose-phosphate aldolase from2 entamoeba histolytica Resolution 1.70 Å

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		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.						.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure																																																									.	.	.	.	.
Query SS confidence																																																									.	.	.	.	.
Query Sequence		L	Q	A	S	L	S	V	K	E	K	L	Q	I	A	L	A	L	E	R	M	G	V	D	V	M	E	V	G	F	P	V	S	S	P	G	D	F	E	S	V	Q	T	I	A	R	Q	V	K	N	S	R	V	C	A	L	.	.	.	.	.	A	R	C	V	E	K	D	I	D	V	A	A	E	S	L	K	V	A	E	A
Query Conservation																																																									.	.	.	.	.
Alig confidence																													.	.	.	.	.													.											.	.	.	.	.
Template Conservation																													.	.	.	.	.													.
Template Sequence		L	K	A	D	A	T	E	E	Q	I	R	K	L	C	S	E	A	A	E	Y	K	F	A	S	V	C	V	.	.	.	.	.	N	P	T	W	V	P	L	C	A	E	L	L	.	K	G	T	G	V	K	V	C	T	V	I	G	F	P	L	G	A	T	P	S	E	V	K	A	Y	E	T	K	V	A	V	E	Q	G	A
Template Known Secondary structure				T	T																	T		S					.	.	.	.	.		G	G	G								T	.	T	T	S	S								S	T	T	T			S															T	T
Template Predicted Secondary structure																													.	.	.	.	.													.
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.						.	.	.	.	.	.	.	.	50	.	.	.		.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure																																																																																.	.
Query SS confidence																																																																																.	.
Query Sequence		F	R	I	H	T	F	I	A	T	S	P	M	H	I	A	T	K	L	R	S	T	L	D	E	V	I	E	R	A	I	Y	M	V	K	R	A	R	N	Y	T	D	D	V	E	F	S	C	E	D	A	G	R	T	P	I	A	D	L	A	R	V	V	E	A	A	I	N	A	G	A	T	T	I	N	I	P	D	T	.	.
Query Conservation																																																																																.	.
Alig confidence												.	.	.	.	.																							.	.														.																										.	.
Template Conservation												.	.	.	.	.																							.	.														.
Template Sequence		E	E	V	D	M	V	I	N	I	G	.	.	.	.	.	M	V	K	A	K	K	Y	D	D	V	E	K	D	V	K	A	V	V	D	A	S	G	.	.	K	A	L	T	K	V	I	I	E	C	C	Y	L	.	T	N	E	E	K	V	E	V	C	K	R	C	V	A	A	G	A	E	Y	V	K	T	S	T	G	F	G
Template Known Secondary structure		S										.	.	.	.	.				T	T																	T	.	.	T	S								G	G	G	S	.																T		S							S	S	S
Template Predicted Secondary structure												.	.	.	.	.																							.	.														.
Template SS confidence
		89	90	.	.	.	.	.	.	.	.						.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120			.	.	.	.	.	.	.	.	.	130	.	.	.		.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	G	Y	T	M	P	F	E	F	A	G	I	I	S	G	L	Y	E	R	V	P	N	I	D	K	A	I	I	S	V	H	T	H	D	D	L	G	L	A	V	G	N	S	L	A	A	V	H	A	G	A	R	Q	V	E	G	A
Query Conservation
Alig confidence																						.	.	.	.											.	.	.	.	.
Template Conservation																						.	.	.	.											.	.	.	.	.
Template Sequence		T	H	G	A	T	P	E	D	V	K	L	M	K	D	T	V	G	D	K	A	.	.	.	.	L	V	K	A	A	G	G	I	R	T	.	.	.	.	.	F	D	D	A	M	K	M	I	N	N	G	A	S	R	I	G	A	S
Template Known Secondary structure		S																T	T	S	S	.	.	.	.						S	S			S	.	.	.	.	.										T	T							S
Template Predicted Secondary structure																						.	.	.	.											.	.	.	.	.
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180					.	.	.	.	.	.	.	.	.	190						.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions