Job Description P09151 Confidence 94.64% Date Thu Jan 5 11:01:59 GMT 2012 Rank 84 Aligned Residues 204 % Identity 13% Template c3ngfA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:ap endonuclease, family 2; PDBTitle: crystal structure of ap endonuclease, family 2 from brucella2 melitensis Resolution 1.80 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																																																																															.	.	.
Query SS confidence																																																																															.	.	.
Query Sequence		M	S	Q	Q	V	I	I	F	D	T	T	L	R	D	G	E	Q	A	L	Q	A	S	L	S	V	K	E	K	L	Q	I	A	L	A	L	E	R	M	G	V	D	V	M	E	V	G	F	P	V	S	S	P	G	D	F	E	S	V	Q	T	I	A	R	Q	V	K	N	S	R	V	C	A	L	A	R	C	V	.	.	.
Query Conservation																																																																															.	.	.
Alig confidence																.	.	.	.	.	.	.	.											.	.	.														.	.																												.	.	.
Template Conservation																.	.	.	.	.	.	.	.											.	.	.														.	.
Template Sequence		M	P	R	F	A	A	N	L	S	T	M	F	N	E	.	.	.	.	.	.	.	.	V	P	F	L	E	R	F	R	L	A	.	.	.	A	E	A	G	F	G	G	V	E	F	L	F	P	.	.	Y	D	F	D	A	D	V	I	A	R	E	L	K	Q	H	N	L	T	Q	V	L	F	N	M	P	P	G	D	W	A
Template Known Secondary structure									T	T	T	S		T	T	.	.	.	.	.	.	.	.	S										.	.	.			T	T		S					S			.	.	T	T	S												T	T											S		T	T
Template Predicted Secondary structure																.	.	.	.	.	.	.	.											.	.	.														.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.									.	.	.	.	.	20	.	.	.	.				.	.	.	.	.	30	.	.	.	.	.	.	.			.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.
																		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																														.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																														.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	K	D	I	D	V	A	A	E	S	L	K	V	A	E	A	F	R	I	H	T	F	I	A	T	S	P	M	H	I	A	T	K	L	R	S	T	L	D	E	V	I	E	R	A	I	Y	M	V	K	R	A	R	N	Y	T	D	D	V	E	F	.	.	.
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																														.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.																									.	.	.
Template Conservation																																																				.	.	.
Template Sequence		A	G	E	R	G	M	A	A	I	S	G	R	E	Q	E	F	R	D	N	V	D	I	A	L	H	Y	A	L	A	L	D	C	R	T	L	H	A	M	S	G	I	T	E	G	L	D	R	K	A	C	.	.	.	E	E	T	F	I	E	N	F	R	Y	A	A	D	K	L	A	P	H	G	I	T	V	L	V	E	P	L
Template Known Secondary structure		T	T			B		T	T		T	T																			T	T								B		B		T	T	S						.	.	.																G	G	G	T
Template Predicted Secondary structure																																																				.	.	.
Template SS confidence
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.				.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.			.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure																																									.	.
Query SS confidence																																									.	.
Query Sequence		S	C	E	D	A	G	R	T	P	I	A	D	L	A	R	V	V	E	A	A	I	N	A	G	A	T	T	I	N	I	P	D	T	V	G	Y	T	M	P	.	.	F	E	F	A	G	I	I	S	G	L	Y	E	R	V	P	N	I	D	K	A	I	I	S	V	H	T	H	D	D	L	G	L	A	V	G	N	S	L	A
Query Conservation																																									.	.
Alig confidence																																									.	.															.	.	.	.	.	.	.											.	.	.	.	.	.	.	.
Template Conservation																																																									.	.	.	.	.	.	.											.	.	.	.	.	.	.	.
Template Sequence		N	T	R	N	M	P	G	Y	F	I	V	H	Q	L	E	A	V	G	L	V	K	R	V	N	R	P	N	V	A	V	Q	L	D	L	Y	H	A	Q	I	M	D	G	D	L	T	R	L	I	E	K	M	N	G	A	F	.	.	.	.	.	.	.	S	H	V	Q	I	A	S	V	P	D	.	.	.	.	.	.	.	.
Template Known Secondary structure			T	T	T	S	T	T	B	S																	T	T														T										T	T	T	S		.	.	.	.	.	.	.								T	T	T	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																									.	.	.	.	.	.	.											.	.	.	.	.	.	.	.
Template SS confidence
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.								200	.	.	.	.	.	.	.	.	.
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	H	A	G	A	R	Q	V	E	G	A	M	N	G	I	G	E	R	A	G	N	C	S	L	E	E	V	I	M	A	I	K
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.							.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.							.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	R	H	E	P	D	E	.	.	G	E	L	N	Y	P	Y	L	F	S	V	L	E
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.				T	T	S	.	.	S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.							.	.
Template SS confidence
														210	.	.	.	.	.			.	.	.	.	220	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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