Job Description P09151 Confidence 98.07% Date Thu Jan 5 11:01:59 GMT 2012 Rank 28 Aligned Residues 166 % Identity 22% Template c3navB_ PDB info PDB header:lyase Chain: B: PDB Molecule:tryptophan synthase alpha chain; PDBTitle: crystal structure of an alpha subunit of tryptophan synthase from2 vibrio cholerae o1 biovar el tor str. n16961 Resolution 2.10 Å

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		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.																							.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.				.	.	.	.
Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.
Query SS confidence																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.
Query Sequence		S	V	K	E	K	L	Q	I	A	L	A	L	E	R	M	G	V	D	V	M	E	V	G	F	P	V	S	S	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	D	F	E	S	V	Q	T	I	A	R	Q	V	K	N	S	R	V	C	A	L	A	.	.	.	R	C	V	E
Query Conservation																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.
Alig confidence																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.
Template Conservation
Template Sequence		N	P	E	Q	S	L	A	I	M	Q	T	L	I	D	A	G	A	D	A	L	E	L	G	M	P	F	S	D	P	L	A	D	G	P	T	I	Q	G	A	N	L	R	A	L	A	A	K	T	T	P	D	I	C	F	E	L	I	A	Q	I	R	A	R	N	P	E	T	P	I	G	L	L	M	Y	A	N	L	V	Y	A
Template Known Secondary structure																T	T		S	S										T	T																T	T																		T	T	S													T
Template Predicted Secondary structure
Template SS confidence
		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	D	I	D	V	A	A	E	S	L	K	V	A	E	A	F	R	I	H	T	F	I	A	T	S	P	M	H	I	A	T	K	L	R	S	T	L	D	E	V	I	E	R	A	I	Y	M	V	K	R	A	R	N	Y	T	D	D	V	E	F	S	C	E	D	A	G	R	T	P	I	A	D	L	A	R	V	V	E	A	A
Query Conservation
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.
Template Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.
Template Sequence		R	G	I	D	D	F	Y	Q	R	C	Q	K	A	G	V	D	S	V	L	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	D	V	P	T	N	E	S	Q	P	F	V	A	A	A	E	K	F	G	I	Q	P	I	F	I	A	P	P	T	A	S	D	.	.	.	.	.	.	E	T	L	R	A	V
Template Known Secondary structure		T													T							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	S		G	G	G											T	T									T	T			S	.	.	.	.	.	.
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.
Template SS confidence
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.																	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160							.	.	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.		.	.	.	220	.	.	.	.	.
Predicted Secondary structure																																																												.
Query SS confidence																																																												.
Query Sequence		I	N	A	G	A	T	T	I	N	I	P	D	T	V	G	Y	T	M	P	F	E	F	A	G	I	I	S	G	L	Y	E	R	V	P	N	I	D	K	A	I	I	S	V	H	T	H	D	D	L	G	L	A	V	G	N	S	L	A	.	A	V	H	A	G	A	R	Q	V
Query Conservation																																																												.
Alig confidence																	.	.	.	.	.	.													.	.	.	.							.	.	.	.												.
Template Conservation																	.	.	.	.	.	.													.	.	.	.							.	.	.	.
Template Sequence		A	Q	L	G	K	G	Y	T	Y	L	L	S	R	A	P	.	.	.	.	.	.	V	H	A	L	L	E	R	L	Q	Q	F	D	.	.	.	.	A	P	P	A	L	L	.	.	.	.	G	F	G	I	S	E	P	A	Q	V	K	Q	A	I	E	A	G	A	A	G	A
Template Known Secondary structure							S										.	.	.	.	.	.											T	T	.	.	.	.							.	.	.	.		S	S			S										T	T		S
Template Predicted Secondary structure																	.	.	.	.	.	.													.	.	.	.							.	.	.	.
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.							.	.	.	.	.	.	.	.	190	.	.	.					.	.	.	.	.	.					200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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