Job Description P09151 Confidence 90.13% Date Thu Jan 5 11:01:59 GMT 2012
Rank 164 Aligned Residues 112
% Identity 11% Template c3n2xB_
PDB info
PDB header: lyaseChain: B: PDB Molecule: uncharacterized protein yage;
PDBTitle: crystal structure of yage, a prophage protein belonging to the2 dihydrodipicolinic acid synthase family from e. coli k12 in complex3 with pyruvate
Resolution 2.20 Å
Show / Hide SS confidence
Show / Hide Conservation and Alignment quality
   
78 . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140 . . . . . . . . . 150 . . . . . . .
Predicted Secondary structure  
Query SS confidence  
Query Sequence  
E K D I D V A A E S L K V A E A F R I H T F I A T S P M H I A T K L R S T L D E V I E R A I Y M V K R A R N Y T D D V E F S C E D A G R T P I A D L A R V V E A
Query Conservation  
                                                                                                           
Alig confidence  
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Template Conservation  
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Template Sequence  
K P G T A A L I D D L I K A G V D G L F F L G S G G E .
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F S Q L G A E E R K A I A R F A I D H V D R R V P V L I .
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G T G G T N A R E T I E L S Q H
Template Known Secondary structure  
T T S S S T T T T . . . . . G G G S T T S S . . . . S S
Template Predicted Secondary structure  
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Template SS confidence  
   
33 . . . . . . 40 . . . . . . . . . 50 . . . . . . . . .
60 . . . . . . . . . 70 . . . . . . . . . 80 . . . . . . .
. . 90 . . . . . . . . . 100 . . .
 
   
158 . 160 . . . . . . . . . 170 . .
. . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . .
Predicted Secondary structure  
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Query SS confidence  
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Query Sequence  
A I N A G A T T I N I P D T V .
G Y T M P F E F A G I I S G L Y E R V P N I D K A I I S V H
Query Conservation  
              .                                      
Alig confidence  
. . . . .
Template Conservation  
                                                    . . . .    
Template Sequence  
A Q Q A G A D G I V V I N P Y Y W K V S E A N L I R Y F E Q V A D S V .
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T L P V M L Y
Template Known Secondary structure  
T S S S S T . . . . S S
Template Predicted Secondary structure  
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Template SS confidence  
   
104 . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . .
. 140 . . . . .
 
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf ] [Import into BibTeX ]