Job Description P09151 Confidence 88.98% Date Thu Jan 5 11:01:59 GMT 2012 Rank 185 Aligned Residues 198 % Identity 12% Template c3l23A_ PDB info PDB header:isomerase Chain: A: PDB Molecule:sugar phosphate isomerase/epimerase; PDBTitle: crystal structure of sugar phosphate isomerase/epimerase2 (yp_001303399.1) from parabacteroides distasonis atcc 8503 at 1.70 a3 resolution Resolution 1.70 Å

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		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.				.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure																																		.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																		.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	Q	A	L	Q	A	S	L	S	V	K	E	K	L	Q	I	A	L	A	L	E	R	M	G	V	D	V	M	E	V	G	F	.	.	.	P	V	S	S	P	G	D	F	E	S	V	Q	T	I	A	R	Q	V	K	N	S	R	V	C	A	L	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																		.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																		.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	Y	S	L	S	Q	E	L	Y	K	G	D	V	A	A	N	L	R	K	V	K	D	X	G	Y	S	K	L	E	L	A	G	Y	G	K	G	A	I	G	G	V	P	X	X	D	F	K	K	X	A	E	D	A	G	L	K	I	I	S	S	H	V	N	P	V	D	T	S	I	S	D	P	F	K	A	X	I	F	K	Y
Template Known Secondary structure		G	G	G	G	G	G	G	G	G	S	S												T	T											T	T			T	T													T	T											B		T	T		S	S	T	T	T	T	B			S
Template Predicted Secondary structure
Template SS confidence
		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
							75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.																																																																	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.																																																																	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	R	C	V	E	K	D	I	D	V	A	A	E	S	L	K	V	A	E	A	F	R	I	H	T	F	I	A	T	S	P	M	H	I	A	T	K	L	R	S	T	L	D	E	V	I	E	R	A	I	Y	M	V	K	R	A	R	N	Y	T	D	D	V	E	F	.	.	.	.	.	.	.	.	.	.	.
Query Conservation		.	.	.	.	.																																																																	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.																																				.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																										.	.	.	.	.
Template Sequence		S	K	E	V	T	P	K	I	X	E	Y	W	K	A	T	A	A	D	H	A	K	L	G	C	K	Y	L	I	Q	P	X	X	P	T	I	T	T	H	D	E	.	.	.	.	.	A	K	L	V	C	D	I	F	N	Q	A	S	D	V	I	K	A	E	G	I	A	T	G	F	G	Y	H	N	H	N	X	E	F	N	R
Template Known Secondary structure			T	T	T																		T	T		S						S						S				.	.	.	.	.																		T	T		T	T								S	G	G	G	S
Template Predicted Secondary structure																																										.	.	.	.	.
Template SS confidence
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.						170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.			.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure																																					.	.
Query SS confidence																																					.	.
Query Sequence		S	C	E	D	A	G	R	T	P	I	A	D	L	A	R	V	V	E	A	A	I	N	A	G	A	T	T	I	N	I	P	D	T	V	G	.	.	Y	T	M	P	F	E	F	A	G	I	I	S	G	L	Y	E	R	V	P	N	I	D	K	A	I	I	S	V	H	T	H	D	D	L	G	L	A	V	G	N	S	L	A
Query Conservation																																					.	.
Alig confidence																																					.	.																			.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.
Template Conservation																																																									.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.
Template Sequence		V	A	T	K	E	Q	Q	F	X	K	V	G	D	Q	I	Y	D	L	X	L	K	D	T	D	P	S	K	V	Y	F	E	X	D	V	Y	W	T	V	X	G	Q	N	D	P	V	E	Y	X	Q	K	H	P	D	R	I	.	.	.	.	.	.	.	K	V	L	H	I	K	D	R	A	.	.	.	.	.	.	.	.	.
Template Known Secondary structure					T	T	T						S											S		T	T	T													T	T											T	T	T		.	.	.	.	.	.	.								S	S	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																									.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.
Template SS confidence
		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.								260	.	.	.	.	.	.	.	.
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	H	A	G	A	R	Q	V	E	G	A	M	N	G	I	G	E	R	A	G	N	C	S	L	E	E	V	I	M	A	I	K
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	F	G	Q	S	G	X	X	N	F	E	X	I	F	K	Q	X	Y
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	T	T	S	S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																	279	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions