Job Description P09151 Confidence 93.60% Date Thu Jan 5 11:01:59 GMT 2012 Rank 105 Aligned Residues 208 % Identity 16% Template c3kwsB_ PDB info PDB header:isomerase Chain: B: PDB Molecule:putative sugar isomerase; PDBTitle: crystal structure of putative sugar isomerase (yp_001305149.1) from2 parabacteroides distasonis atcc 8503 at 1.68 a resolution Resolution 1.68 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																																.	.
Query SS confidence																																																																																.	.
Query Sequence		M	S	Q	Q	V	I	I	F	D	T	T	L	R	D	G	E	Q	A	L	Q	A	S	L	S	V	K	E	K	L	Q	I	A	L	A	L	E	R	M	G	V	D	V	M	E	V	G	F	P	V	S	S	P	G	D	F	E	S	V	Q	T	I	A	R	Q	V	K	N	S	R	V	C	A	L	A	R	C	V	E	.	.
Query Conservation																																																																																.	.
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.																			.																			.														.	.
Template Conservation																		.	.	.	.	.	.	.	.	.	.	.																			.																			.
Template Sequence		L	E	L	K	L	S	F	Q	E	G	I	A	P	G	E	S	.	.	.	.	.	.	.	.	.	.	.	L	N	E	K	L	D	F	X	E	K	L	G	V	V	G	F	E	P	.	G	G	G	G	L	A	G	R	V	N	E	I	K	Q	A	L	N	G	.	R	N	I	K	V	S	A	I	C	A	G	F	K	G	F
Template Known Secondary structure										T	T	S	S			S	S	.	.	.	.	.	.	.	.	.	.	.											T	T							.	B	S	T	T													T	T	.	S	S												S
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.																			.																			.
Template SS confidence
		49	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.												.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.		.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100		.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
															79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.		.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.					140
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.																																		.																													.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																																		.																													.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	K	D	I	D	V	A	A	E	S	L	K	V	A	E	A	F	R	I	H	T	F	I	A	T	S	P	M	H	I	A	T	K	L	.	R	S	T	L	D	E	V	I	E	R	A	I	Y	M	V	K	R	A	R	N	Y	T	D	D	V	E	F	S	.	.	.	.	C
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.																																		.																													.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																																		.																													.	.	.	.
Template Conservation
Template Sequence		I	L	S	T	D	P	A	I	R	K	E	C	X	D	T	X	K	E	I	I	A	A	A	G	E	L	G	S	T	G	V	I	I	V	P	A	F	N	G	Q	V	P	A	L	P	H	T	X	E	T	R	D	F	L	C	E	Q	F	N	E	X	G	T	F	A	A	Q	H	G	T	S	V	I	F	E	P	L	N	R	K
Template Known Secondary structure		T	T	B	S	S																					T	T		S						S			T	T			S	B			S	S																					T	T										T	T
Template Predicted Secondary structure
Template SS confidence
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure
Query SS confidence
Query Sequence		E	D	A	G	R	T	P	I	A	D	L	A	R	V	V	E	A	A	I	N	A	G	A	T	T	I	N	I	P	D	T	V	G	Y	T	M	P	F	E	F	A	G	I	I	S	G	L	Y	E	R	V	P	N	I	D	K	A	I	I	S	V	H	T	H	D	D	L	G	L	A	V	G	N	S	L	A	A	V	H	A
Query Conservation
Alig confidence																				.																																	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																				.																																	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	C	F	Y	L	R	Q	V	A	D	A	A	S	L	C	R	D	I	.	N	N	P	G	V	R	C	X	G	D	F	W	H	X	T	W	E	E	T	S	D	X	G	A	F	I	S	G	G	E	Y	L	.	.	.	.	.	.	.	Q	H	V	H	V	A	S	R	K	R	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		T		S	S															.			T	T															S										G	G	G		.	.	.	.	.	.	.								T	T	T	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																				.																																	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.		.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.								.	.	.	.	250	.	.	.	.	.
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	R	Q	V	E	G	A	M	N	G	I	G	E	R	A	G	N	C	S	L	E	E	V	I	M	A	I	K
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	R	S	X	P	G	E	D	G	D	A	D	N	Y	I	N	G	F	K	G	L	K
Template Known Secondary structure		.	.	.	.	.	.	.	.	S	S	S	T	T	T	T	G	G	G
Template Predicted Secondary structure		.	.	.	.	.	.	.	.
Template SS confidence
										256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions