Job Description P09151 Confidence 90.62% Date Thu Jan 5 11:01:59 GMT 2012 Rank 156 Aligned Residues 214 % Identity 13% Template c3kruC_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:nadh:flavin oxidoreductase/nadh oxidase; PDBTitle: crystal structure of the thermostable old yellow enzyme from2 thermoanaerobacter pseudethanolicus e39 Resolution 1.60 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.															.	.	.	.	.	.	60	.	.	.	.	.
Predicted Secondary structure																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Query SS confidence																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Query Sequence		M	S	Q	Q	V	I	I	F	D	T	T	L	R	D	G	E	Q	A	L	Q	A	S	L	S	V	K	E	K	L	Q	I	A	L	A	L	E	R	M	G	V	D	V	M	E	V	G	F	P	V	S	S	P	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	F	E	S	V	Q	T	I	A	R	Q	V	.
Query Conservation																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Alig confidence													.	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Template Conservation													.	.	.
Template Sequence		I	K	N	R	I	M	M	S	P	M	C	.	.	.	M	Y	S	A	S	T	D	G	M	P	N	D	W	H	I	V	H	Y	A	T	R	A	I	G	G	V	G	L	I	M	Q	E	A	T	A	V	E	S	R	G	R	I	T	D	H	D	L	G	I	W	N	D	E	Q	V	K	E	L	K	K	I	V	D	I	C	K
Template Known Secondary structure			S	S	S								.	.	.				S		T	T																	T	T		S									S	S	G	G	G		S	S	T	T	S		B		S	S	T
Template Predicted Secondary structure													.	.	.
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.				.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
			66	.	.	.	70	.	.	.	.																																						.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
Predicted Secondary structure		.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.
Query SS confidence		.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.
Query Sequence		.	K	N	S	R	V	C	A	L	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	C	V	E	K	D	I	D	V	A	A	E	S	L	K	V	A	E	A	F	R	I	H	T	.	.	.	.	.	.	.	.	.
Query Conservation		.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.
Alig confidence		.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	N	G	A	V	M	G	I	Q	L	A	H	A	G	R	K	C	N	I	S	Y	E	D	V	V	G	P	S	P	I	K	A	G	D	R	Y	K	L	P	R	E	L	S	V	E	E	I	K	S	I	V	K	A	F	G	E	A	A	K	R	A	N	L	A	G	Y	D	V	V	E	I	H	A	A	H	G	Y	L	I	H
Template Known Secondary structure			T	T											G	G	G				T	T	S					S	S	S			S	S	T	T	S																													T		S								T	T	S
Template Predicted Secondary structure
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
			99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.						.	.	.	.	.	.	140	.	.	.	.			.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure		.																																				.	.	.	.	.												.	.																									.	.
Query SS confidence		.																																				.	.	.	.	.												.	.																									.	.
Query Sequence		.	F	I	A	T	S	P	M	H	I	A	T	K	L	R	S	T	L	D	E	V	I	E	R	A	I	Y	M	V	K	R	A	R	N	Y	T	.	.	.	.	.	D	D	V	E	F	S	C	E	D	A	G	.	.	R	T	P	I	A	D	L	A	R	V	V	E	A	A	I	N	A	G	A	T	T	I	N	I	.	.
Query Conservation		.																																				.	.	.	.	.												.	.																									.	.
Alig confidence		.																																				.	.	.	.	.												.	.															.										.	.
Template Conservation																																																																						.
Template Sequence		E	F	L	S	P	L	S	N	K	R	K	D	E	Y	G	N	S	I	E	N	R	A	R	F	L	I	E	V	I	D	E	V	R	K	N	W	P	E	N	K	P	I	F	V	R	V	S	A	D	D	Y	M	E	G	G	I	N	I	D	M	M	V	E	Y	I	N	M	I	.	K	D	K	V	D	L	I	D	V	S	S
Template Known Secondary structure						T	T	T					S	T	T	S	S	S					T													T	S		T	T	S											S	S	T	T	S														.	T	T	T		S
Template Predicted Secondary structure																																																																						.
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.		240	.	.	.	.	.	.	.	.	.	250
					169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.		.	.	.	.
Predicted Secondary structure		.	.	.																																																						.
Query SS confidence		.	.	.																																																						.
Query Sequence		.	.	.	P	D	T	V	G	Y	T	M	P	F	E	F	A	G	I	I	S	G	L	Y	E	R	V	P	N	I	D	K	A	I	I	S	V	H	T	H	D	D	L	G	L	A	V	G	N	S	L	A	A	V	H	A	G	.	A	R	Q	V
Query Conservation		.	.	.																																																						.
Alig confidence		.	.	.																								.	.	.	.													.	.	.												.
Template Conservation																												.	.	.	.													.	.	.
Template Sequence		G	G	L	L	N	V	D	I	N	L	Y	P	G	Y	Q	V	K	Y	A	E	T	I	K	K	R	C	.	.	.	.	N	I	K	T	S	A	V	G	L	I	T	T	.	.	.	Q	E	L	A	E	E	I	L	S	N	E	R	A	D	L	V
Template Known Secondary structure				S	S								T	T	T	T												.	.	.	.	T							S	S				.	.	.										T	T	S		S
Template Predicted Secondary structure																												.	.	.	.													.	.	.
Template SS confidence
		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.					.	.	.	280	.	.	.	.	.	.	.	.				.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions