|   |
24 | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | |
|
|
|
|
|
. | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | V | K | E | K | L | Q | I | A | L | A | L | E | R | M | G | V | D | V | M | E | V | G | F | P | V | S | S | P | G | D | F | E | S | V | Q | T | I | A | R | Q | V | K | N | S | R | V | C | A | L | A | R | C | V | E | K | D | I | . |
. |
. |
. |
. |
. |
D | V | A | A | E | S | L | K | V | A | E | A | F | R | I | H |
Query Conservation |   |
|   |
|   |
|
|   |
|
|   |   |
|   |   |   |
|
|   |   |
|
|
|
|   |
|   |
|
|   |   |
|   |
|   |
|   |   |
|   |   |   |   |   |   |   |   |
|   |
|
|   |
|   |   |   |   |
|
| . | . | . | . | . | . |
|   |
|   |
|
|
|   |   |   |
|   |   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |
|   |   |   |
|   |
|
|   |   |   |
|
|   |   |
|   |   |   |   |   | . | . | . | . | . | . | . |   |   |
|   |   |
|
|   |   |   |   |   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|   |
|   |
Template Sequence |   |
K | P | E | I | V | A | A | X | A | L | A | A | E | Q | A | G | A | V | A | V | R | I | E | G | I | . |
. |
. |
. |
. |
. |
. |
D | N | L | R | X | T | R | S | L | V | S | V | P | I | I | G | I | I | K | R | D | L | D | E | S | P | V | R | I | T | P | F | L | D | D | V | D | A | L | A | Q | A | G | A | A | I | I | A |
Template Known Secondary structure |   |
S |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T |
| S |  |  |  |  |  | S |  | . | . | . | . | . | . | . |  |  |  |  |  |  | B | T | T | B |
| S |
|  |  |  |  |
| B |
|
|
| S | S |
| S |
|
| B | S |
| S |  |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|
|  | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
31 | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | |
|
|
|
|
|
|
. | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . |
  |
  |   |
98 | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | |
|
|
170 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
| . | . | . |
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
Query Sequence |   |
T | F | I | A | T | S | P | M | H | I | A | T | K | L | R | S | T | L | D | E | V | I | E | R | A | I | Y | M | V | K | R | A | R | N | Y | T | D | D | V | E | F | S | C | E | D | A | G | R | T | P | I | A | D | L | A | R | V | V | E | A | A | I | N | A | G | A | T | T | I | N | I | P | . |
. |
. |
D | T | V | G | Y |
Query Conservation |   |
|   |   |   |   |
|
|   |
|   |   |   |   |   |   |   |
|   |
|
|   |   |   |   |   |   |   |   |
|   |   |
|
|   |   |
|   |   |
|   |   |   |   |
|
|   |   |
|   |   |   |
|   |
|   |   |   |   |   |   |
|   |   |   |
|
|
|   |
|   |
|   | . | . | . |
|
|   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|   |   |   |   |   |
| . | . | . | . | . | . | . | . | . |   |   |   |
|   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
V | D | G | T | A | R | Q | R | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
P | V | A | V | E | A | L | L | A | R | I | H | H | H | H | L | L | T | X | A | D | C | S | S | . |
. |
. |
. |
. |
. |
. |
. |
. |
V | D | D | G | L | A | C | Q | R | L | G | A | D | I | I | G | T | T | X | S | G | Y | T | T | P | D |
Template Known Secondary structure |   |
 |  |
|
|
| S | S |
| . | . | . | . | . | . | . | . | . | . | . | . | . | S | S |
|  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |
|
| S | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  | T |
| S |  |  |  |
| T | T | T | T |
| S | S | S |
|
Template Predicted Secondary structure |   |
 |
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
104 | . | . | . | . | . | 110 | . | |
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | |
|
|
|
|
|
|
|
|
. | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . |
  |
  |   |
175 | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | |
210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
| . |
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | M | P | F | E | F | A | G | I | I | S | G | L | Y | E | R | V | P | N | I | D | K | A | I | I | S | V | H | T | H | D | D | L | G | L | . |
A | V | G | N | S | L | A | A | V | H | A | G | A | R | Q | V |
Query Conservation |   |
  |   |
|   |   |
|   |   |
|
|   |   |
|   |   |   |
|
|   |   |   |   |
|   |
|   |   |
|   |
|
|
|   |
|
| . |
|
|
|
|
|
|
|
|
|   |
|
|
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
| . | . | . | . |
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   | . | . | . | . | . |   |
|
|
|
|
|   |
| . | . | . | . |
|
|   |
|   |
|
|
|   |   |   |   |   |   |
|
|
|
|
|
Template Sequence |   |
T | P | E | E | P | D | L | P | L | V | K | A | L | H | D | A | . |
. |
. |
. |
. |
G | C | R | V | I | A | E | G | . |
. |
. |
. |
R | Y | N | S | P | A | L | A | A | E | A | I | R | Y | G | A | W | A | V |
Template Known Secondary structure |   |
|
| S | S |
|
|  |  |  |  |  |  |  |  |  | T | . | . | . | . | . | T |
|
|  |  |  |  | S | . | . | . | . |
|
|
| S |  |  |  |  |  |  |  |  |  | T | T |
| S |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
| . | . | . | . | . |
|
|  |  |  |  |  |
| . | . | . | . |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
162 | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | |
|
|
|
|
. | . | 180 | . | . | . | . | . | |
|
|
|
. | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . |
  |