Job Description P09151 Confidence 92.14% Date Thu Jan 5 11:01:59 GMT 2012 Rank 132 Aligned Residues 223 % Identity 15% Template c3fa4D_ PDB info PDB header:lyase Chain: D: PDB Molecule:2,3-dimethylmalate lyase; PDBTitle: crystal structure of 2,3-dimethylmalate lyase, a pep mutase/isocitrate2 lyase superfamily member, triclinic crystal form Resolution 2.18 Å

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		32	.	.	.	.	.	.	.	40	.	.	.	.	.											.	.	.	.	50	.	.					.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.				.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.								.	.	.	.																										.	.	.
Query SS confidence																.	.	.	.	.	.	.	.	.	.								.	.	.	.																										.	.	.
Query Sequence		A	L	A	L	E	R	M	G	V	D	V	M	E	V	.	.	.	.	.	.	.	.	.	.	G	F	P	V	S	S	P	.	.	.	.	G	D	F	E	S	V	Q	T	I	A	R	Q	V	K	N	S	R	V	C	A	L	A	R	C	V	.	.	.	E	K	D	I	D	V	A	A	E	S	L	K	V	A	E	A	F
Query Conservation																.	.	.	.	.	.	.	.	.	.								.	.	.	.																										.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.								.	.	.	.																										.	.	.
Template Conservation
Template Sequence		A	R	V	A	L	S	A	G	F	D	A	L	Y	M	T	G	A	G	T	A	A	S	V	H	G	Q	A	D	L	G	I	C	T	L	N	D	M	R	A	N	A	E	M	I	S	N	I	S	P	S	T	P	V	I	A	D	A	D	T	G	Y	G	G	P	I	M	V	A	R	T	T	E	Q	Y	S	R	S	G	V	A
Template Known Secondary structure							T	T	T		S														T	S	S		S	S	S																		S	T	T	S							T	T		S	S	S														T	T
Template Predicted Secondary structure
Template SS confidence
		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130			.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure																																						.	.
Query SS confidence																																						.	.
Query Sequence		R	I	H	T	F	I	A	T	S	P	M	H	I	A	T	K	L	R	S	T	L	D	E	V	I	E	R	A	I	Y	M	V	K	R	A	R	.	.	N	Y	T	D	D	V	E	F	S	C	E	D	A	G	R	T	P	I	A	D	L	A	R	V	V	E	A	A	I	N	A	G	A	T	T	I	N	I	P	D	T	V
Query Conservation																																						.	.
Alig confidence												.	.	.	.	.																						.	.
Template Conservation												.	.	.	.	.
Template Sequence		A	F	H	I	E	D	Q	V	Q	T	.	.	.	.	.	K	I	L	V	D	T	D	T	Y	V	T	R	I	R	A	A	V	Q	A	R	Q	R	I	G	S	D	I	V	V	I	A	R	T	D	S	L	Q	T	H	G	Y	E	E	S	V	A	R	L	R	A	A	R	D	A	G	A	D	V	G	F	L	E	G	I	T
Template Known Secondary structure								B				.	.	.	.	.			B																					T																															T		S					T	T
Template Predicted Secondary structure												.	.	.	.	.
Template SS confidence
		112	.	.	.	.	.	.	.	120	.						.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	Y	T	M	P	F	E	F	A	G	I	I	S	G	L	Y	E	R	V	P	N	I	D	K	A	I	I	S	V	H	T	H	D	D	L	G	L	A	V	G	N	S	L	A	A	V	H	A	G	A	R	Q	V	E	G	A	M	N	G	I	G	E	R	A	G	N	C	S	L	E	E	V	I	M	A	I	K	V	R	K
Query Conservation
Alig confidence		.	.	.	.	.	.	.														.	.	.																																						.	.																		.
Template Conservation		.	.	.	.	.	.	.														.	.	.																																						.	.																		.
Template Sequence		.	.	.	.	.	.	.	S	R	E	M	A	R	Q	V	I	Q	D	L	A	.	.	.	G	W	P	L	L	L	N	M	V	E	H	G	A	T	P	S	I	S	A	A	E	A	K	E	M	G	F	R	I	I	I	F	P	F	A	A	L	.	.	G	P	A	V	A	A	M	R	E	A	M	E	K	L	K	R	D	.
Template Known Secondary structure		.	.	.	.	.	.	.												T	T	.	.	.	T	S		B						T	T	S	S	S												T		S					T	T	T	T		.	.																		.
Template Predicted Secondary structure		.	.	.	.	.	.	.														.	.	.																																						.	.																		.
Template SS confidence
									195	.	.	.	.	200	.	.	.	.	.	.	.				.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.			.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	I	L	N	V	H	T	A	I	N	H	Q	E	I	W	R	T	S	Q	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	I	P	G	L	D	K	E	M	T	P	Q	M	L	F	R	V	C	G	L
Template Known Secondary structure		S	S					T	T		S								T	T
Template Predicted Secondary structure
Template SS confidence
		262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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