Job Description P09151 Confidence 79.43% Date Thu Jan 5 11:01:59 GMT 2012 Rank 230 Aligned Residues 128 % Identity 25% Template c3ez4B_ PDB info PDB header:transferase Chain: B: PDB Molecule:3-methyl-2-oxobutanoate hydroxymethyltransferase; PDBTitle: crystal structure of 3-methyl-2-oxobutanoate2 hydroxymethyltransferase from burkholderia pseudomallei Resolution 2.10 Å

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		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.														.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.					.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.
Query SS confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.
Query Sequence		A	L	A	L	E	R	M	G	V	D	V	M	E	V	G	F	.	.	.	.	.	.	.	.	.	.	.	.	.	P	V	S	S	P	G	D	F	E	S	V	Q	T	I	A	R	Q	V	K	N	S	R	V	C	A	L	A	R	C	V	.	.	.	.	E	K	D	I	D	V	A	A	E	S	L	K	V	A	E	A	F
Query Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.
Template Conservation
Template Sequence		A	A	L	L	D	R	A	N	V	D	V	Q	L	I	G	D	S	L	G	N	V	L	Q	G	Q	A	T	T	L	P	V	T	L	D	D	I	A	Y	H	T	A	C	V	A	R	A	Q	P	R	G	L	V	V	A	D	L	P	F	G	T	Y	G	T	P	A	D	A	F	A	S	A	V	K	L	M	R	A	G	A	Q
Template Known Secondary structure								T	T		S						T	T					T	T			S	S	S	T	T																T			S	S								T	T	S		S	S														T	T		S
Template Predicted Secondary structure
Template SS confidence
		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	I	H	T	F	I	A	T	S	P	M	H	I	A	T	K	L	R	S	T	L	D	E	V	I	E	R	A	I	Y	M	V	K	R	A	R	N	Y	T	D	D	V	E	F	S	C	E	D	A	G	R	T	P	I	A	D	L	A	R	V	V	E	A	A	I	N	A	G	A	T	T	I	N	I	P	D	T	V	G	Y
Query Conservation
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.																										.	.	.	.	.
Template Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.																										.	.	.	.	.
Template Sequence		M	V	K	L	E	G	G	E	W	L	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	T	V	R	F	L	V	E	R	A	V	P	V	C	A	H	V	.	.	.	.	G	L	G	A	A	Q	L	L	R	D	A	R	A	V	E	E	A	G	A	Q	L	I	V	L	E	.	.	.	.	.
Template Known Secondary structure									G	G	G		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									T	T								.	.	.	.																		T		S						.	.	.	.	.
Template Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.																										.	.	.	.	.
Template SS confidence
		108	.	110	.	.	.	.	.	.	.	.																			.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.					.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		175	.	.	.	.	180	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	M	P	F	E	F	A	G	I	I	S	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	V	P	T	L	V	A	A	E	V	T	R
Template Known Secondary structure		S
Template Predicted Secondary structure
Template SS confidence
		180	.	.	.	.	.	.	.	.	.	190	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions