Return to main results Retrieve Phyre Job Id

Job DescriptionP09151
Confidence90.07%DateThu Jan 5 11:01:59 GMT 2012
Rank165Aligned Residues126
% Identity14%Templatec3daqB_
PDB info PDB header:lyaseChain: B: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: crystal structure of dihydrodipicolinate synthase from methicillin-2 resistant staphylococcus aureus
Resolution1.45 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   78.80.........90.........100.........110.........120.........130.........140.........150.......
Predicted Secondary structure 




















Query SS confidence 















































































Query Sequence  EKDIDVAAESLKVAEAFRIHTFIATSPMHIATKLRSTLDEVIERAIYMVKRARNYTDDVEFSCEDAGRTPIADLARVVEA
Query Conservation    


 
 


   
   
 
    

 
       
 

        
  

  
  
    

  
   
 
      
Alig confidence 


























.....



























....















Template Conservation         
  
   

 

   




.....   

  

  
             

 ....

   
    
  
  
Template Sequence  LEALKAHVNFLLENNAQAIIVNGTTAE. . . . . SPTLTTDEKELILKTVIDLVDKRVPVIA. . . . GTGTNDTEKSIQASIQ
Template Known Secondary structure  TT

SSGGGT.....GGGS
TTSS
....


S
Template Predicted Secondary structure 









.....





....




Template SS confidence 















































































   23......30.........40......... 50.........60.........70....... ..80.........90...
 
   158.160........ .170.........180.........190.........200.. .......210......
Predicted Secondary structure 



.














.....






Query SS confidence 










.

































. . . . .













Query Sequence  AINAGATTINI. PDTVGYTMPFEFAGIISGLYERVPNIDKAIISVH. . . . . THDDLGLAVGNSLA
Query Conservation 
   


 
 
. 

 
   
  
  

  
   

    
 
  
..... 


 








Alig confidence 










.






















....






.....













Template Conservation 
   


 


  
 
       
      

 
 ....  





 
  

   
      
 
Template Sequence  AKALGADAIMLITPYYNKTNQRGLVKHFEAIADAV. . . . KLPVVLYNVPSRTNMTIEPETVEILS
Template Known Secondary structure  T
S


SS


....
S

S



Template Predicted Secondary structure 













....












Template SS confidence 
































































   94.....100.........110.........120........ .130.........140.........150....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions