Job Description P09151 Confidence 93.47% Date Thu Jan 5 11:01:59 GMT 2012 Rank 107 Aligned Residues 134 % Identity 13% Template c3cyvA_ PDB info PDB header:lyase Chain: A: PDB Molecule:uroporphyrinogen decarboxylase; PDBTitle: crystal structure of uroporphyrinogen decarboxylase from2 shigella flexineri: new insights into its catalytic3 mechanism Resolution 2.80 Å

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		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.				.	50	.	.	.	.	.	.	.	.						.	60	.	.	.	.	.	.	.	.	.							70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
Predicted Secondary structure																										.	.	.											.	.	.	.	.												.	.	.	.	.	.
Query SS confidence																										.	.	.											.	.	.	.	.												.	.	.	.	.	.
Query Sequence		V	K	E	K	L	Q	I	A	L	A	L	E	R	M	G	V	D	V	M	E	V	G	F	P	.	.	.	V	S	S	P	G	D	F	E	S	V	.	.	.	.	.	Q	T	I	A	R	Q	V	K	N	S	R	.	.	.	.	.	.	V	C	A	L	A	R	C	V	E	K	D	I	D	V	A	A	E	S	L	K	V
Query Conservation																										.	.	.											.	.	.	.	.												.	.	.	.	.	.
Alig confidence																										.	.	.											.	.	.	.	.												.	.	.	.	.	.												.	.	.	.
Template Conservation																																																																								.	.	.	.
Template Sequence		A	K	S	V	T	L	Y	L	N	A	Q	I	K	A	G	A	Q	A	V	M	I	F	D	T	W	G	G	V	L	T	G	R	D	Y	Q	Q	F	S	L	Y	Y	M	H	K	I	V	D	G	L	L	R	E	N	D	G	R	R	V	P	V	T	L	F	T	K	G	G	G	Q	W	.	.	.	.	L	E	A	M	A	E
Template Known Secondary structure															T	T		S							T	T	G	G	G	S									T											S		S			T	T										T	T	T	T	T	T	.	.	.	.						T
Template Predicted Secondary structure																																																																								.	.	.	.
Template SS confidence
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.					.	.	.	.	260	.
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.																.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Query SS confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Query Sequence		A	E	A	F	R	I	H	T	F	I	A	T	S	P	M	H	I	A	T	K	L	R	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	L	D	E	V	I	E	R	A	I	Y	M	V	K	R	A	.	R	N	Y	T	D	D	V	E	F	S	C	E	D	A	G	R	T	P	I	A	D	L	A	R	V
Query Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Template Conservation
Template Sequence		T	G	C	D	A	L	G	L	D	W	T	T	D	I	A	D	A	R	R	R	V	G	N	K	V	A	L	Q	G	N	M	D	P	S	M	L	Y	A	P	P	A	R	I	E	E	E	V	A	T	I	L	A	G	F	G	H	G	E	G	H	V	F	N	L	G	H	G	I	H	Q	D	V	P	P	E	H	A	G	V	F
Template Known Secondary structure		T	S		S						T	T	S										T	T	T	S						B		G	G	G	G	G	S														T	T	T	T	T	S	S				B		B	S	S				T	T	S
Template Predicted Secondary structure
Template SS confidence
		262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.
		155	.	.	.	.	160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	E	A	A	I	N	A	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	E	A	V	H	R	L	S
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		342	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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