Job Description P09151 Confidence 100.00% Date Thu Jan 5 11:01:59 GMT 2012 Rank 5 Aligned Residues 302 % Identity 30% Template c3bleA_ PDB info PDB header:transferase Chain: A: PDB Molecule:citramalate synthase from leptospira interrogans; PDBTitle: crystal structure of the catalytic domain of licms in2 complexed with malonate Resolution 2.00 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.		.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.		.	.	.	.	80	.
Predicted Secondary structure																																.																																											.
Query SS confidence																																.																																											.
Query Sequence		Q	V	I	I	F	D	T	T	L	R	D	G	E	Q	A	L	Q	A	S	L	S	V	K	E	K	L	Q	I	A	L	.	A	L	E	R	M	G	V	D	V	M	E	V	G	F	P	V	S	S	P	G	D	F	E	S	V	Q	T	I	A	R	Q	V	K	N	S	R	V	C	A	L	A	R	.	C	V	E	K	D	I
Query Conservation																																.																																											.
Alig confidence																																.																																											.
Template Conservation
Template Sequence		R	L	E	I	L	D	V	T	L	R	D	G	E	Q	T	R	G	V	S	F	S	T	S	E	K	L	N	I	A	K	F	L	L	Q	K	L	N	V	D	R	V	E	I	A	S	A	R	V	S	K	G	E	L	E	T	V	Q	K	I	M	E	W	A	A	T	E	Q	L	T	E	R	I	E	I	L	G	F	V	D	G
Template Known Secondary structure														T	T	S	T	T																		T	T			S							T	T	S		T	T															T	T		G	G	G							S	S	T
Template Predicted Secondary structure
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.				.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																	.	.	.
Query SS confidence																																																																	.	.	.
Query Sequence		D	V	A	A	E	S	L	K	V	A	E	A	F	R	I	H	T	F	I	A	T	S	P	M	H	I	A	T	K	L	R	S	T	L	D	E	V	I	E	R	A	I	Y	M	V	K	R	A	R	N	Y	T	D	D	V	E	F	S	C	E	D	A	G	.	.	.	R	T	P	I	A	D	L	A	R	V	V	E	A	A
Query Conservation																																																																	.	.	.
Alig confidence																																																																	.	.	.
Template Conservation
Template Sequence		N	K	T	V	D	W	I	K	D	S	G	A	K	V	L	N	L	L	T	K	G	S	L	H	H	L	E	K	Q	L	G	K	T	P	K	E	F	F	T	D	V	S	F	V	I	E	Y	A	I	K	S	G	L	K	I	N	V	Y	L	E	D	W	S	N	G	F	R	N	S	P	D	Y	V	K	S	L	V	E	H	L
Template Known Secondary structure		T										T											S								T																					T	T									T
Template Predicted Secondary structure
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	N	A	G	A	T	T	I	N	I	P	D	T	V	G	Y	T	M	P	F	E	F	A	G	I	I	S	G	L	Y	E	R	V	P	N	I	D	K	A	I	I	S	V	H	T	H	D	D	L	G	L	A	V	G	N	S	L	A	A	V	H	A	G	A	R	Q	V	E	G	A	M	N	G	I	G	E	R	A	G	N
Query Conservation
Alig confidence																																				.	.	.
Template Conservation																																				.	.	.
Template Sequence		S	K	E	H	I	E	R	I	F	L	P	D	T	L	G	V	L	S	P	E	E	T	F	Q	G	V	D	S	L	I	Q	K	Y	P	.	.	.	D	I	H	F	E	F	H	G	H	N	D	Y	D	L	S	V	A	N	S	L	Q	A	I	R	A	G	V	K	G	L	H	A	S	I	N	G	L	G	E	R	A	G	N
Template Known Secondary structure			T	S			S							T	T																				T	.	.	.	T	S							B		T	T	S												T	T		S					B	G	G	G		S	S	T	T		B
Template Predicted Secondary structure																																				.	.	.
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200				.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	S	L	E	E	V	I	M	A	I	K	V	R	K	D	I	L	N	V	H	T	A	I	N	H	Q	E	I	W	R	T	S	Q	L	V	S	Q	I	C	N	M	P	I	P	A	N	K	A	I	V	G	S	G	A	F	A	H	S	S	G	I	H	Q	D	G	V	L	K	N	R	E	N	Y	E	I	M	T	P	E	S
Query Conservation
Alig confidence													.	.	.																																												.	.							.	.	.	.	.	.	.	.	.	.
Template Conservation													.	.	.																																												.	.							.	.	.	.	.	.	.	.	.	.
Template Sequence		T	P	L	E	A	L	V	T	T	I	H	.	.	.	D	K	S	N	S	K	T	N	I	N	E	I	A	I	T	E	A	S	R	L	V	E	V	F	S	G	K	R	I	S	A	N	R	P	I	V	G	E	D	V	F	T	Q	.	.	N	L	Y	A	N	P	.	.	.	.	.	.	.	.	.	.	I	L	P	E	R
Template Known Secondary structure			B										.	.	.			S	S							G	G	G																		T	T		T	T	T	S	T	T	T	T			.	.		T	T			S	.	.	.	.	.	.	.	.	.	.			G	G	G
Template Predicted Secondary structure													.	.	.																																												.	.							.	.	.	.	.	.	.	.	.	.
Template SS confidence
		244	.	.	.	.	.	250	.	.	.	.				.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.			.	.	300	.	.	.											.	.	.	.	.
		319	320	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	G	L	N	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	G	R	K	R
Template Known Secondary structure		G	T
Template Predicted Secondary structure
Template SS confidence
		321	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions