Job Description P09151 Confidence 39.45% Date Thu Jan 5 11:01:59 GMT 2012 Rank 387 Aligned Residues 135 % Identity 16% Template c3aamA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:endonuclease iv; PDBTitle: crystal structure of endonuclease iv from thermus thermophilus hb8 Resolution 1.58 Å

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		68	.	70	.	.	.	.	.		.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.										.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
Predicted Secondary structure										.																												.	.	.	.	.	.	.	.	.
Query SS confidence										.																												.	.	.	.	.	.	.	.	.
Query Sequence		S	R	V	C	A	L	A	R	.	C	V	E	K	D	I	D	V	A	A	E	S	L	K	V	A	E	A	F	R	I	H	T	F	I	A	T	.	.	.	.	.	.	.	.	.	S	P	M	H	I	A	T	K	L	R	S	T	L	D	E	V	I	E	R	A	I	Y	M	V	K	R	A	R	N	Y	T	D	D	V	E
Query Conservation										.																												.	.	.	.	.	.	.	.	.
Alig confidence										.																												.	.	.	.	.	.	.	.	.			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	R	Y	G	F	H	L	S	I	A	G	K	K	G	V	A	G	A	V	E	E	A	T	A	L	G	L	T	A	F	Q	I	F	A	K	S	P	R	S	W	R	P	R	A	L	S	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	E	V	E	A	F	R	A	L	R	E	A	S	G	G	L	P	A
Template Known Secondary structure							B					S	T	T													T		S						S	S		T	T			S							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													T	T
Template Predicted Secondary structure																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.																.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.
		138	.	140	.	.	.	.											.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.	.	.	.	.
Query Sequence		F	S	C	E	D	A	G	.	.	.	.	.	.	.	.	.	.	R	T	P	I	A	D	L	A	R	V	V	E	A	A	I	N	A	G	A	T	T	I	N	I	P	D	T	V	G	Y	T	M	P	F	E	F	A	G	I	I	S	G	L	Y	E	R	V	P	N	I	D	K	A	I	I	S	V	H	T	H	D	D	L
Query Conservation									.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.	.	.																										.	.
Template Conservation																																												.	.
Template Sequence		V	I	H	A	S	Y	L	V	N	L	G	A	E	G	E	L	W	E	K	S	V	A	S	L	A	D	D	L	E	K	A	A	L	L	G	V	E	Y	V	V	V	H	.	.	P	G	S	G	R	P	E	R	V	K	E	G	A	L	K	A	L	R	L	A	G	V	R	S	R	P	V	L	L	V	E	N	T	A	G	G
Template Known Secondary structure							T	T			T	T		S	S	T																				T								.	.			B	S																	T			S	S	S
Template Predicted Secondary structure																																												.	.
Template SS confidence
		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.			.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
		208	.	210	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	A	V	G	N	S	L	A	A	V	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	E	K	V	G	A	R	F	E	E	L	A
Template Known Secondary structure		T	T	B	S			S
Template Predicted Secondary structure
Template SS confidence
		145	.	.	.	.	150	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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