Job Description P09151 Confidence 95.30% Date Thu Jan 5 11:01:59 GMT 2012 Rank 70 Aligned Residues 185 % Identity 17% Template c2zdsB_ PDB info PDB header:dna binding protein Chain: B: PDB Molecule:putative dna-binding protein; PDBTitle: crystal structure of sco6571 from streptomyces coelicolor2 a3(2) Resolution 2.30 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.										.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure																																																.	.	.	.	.	.	.	.	.
Query SS confidence																																																.	.	.	.	.	.	.	.	.
Query Sequence		S	Q	Q	V	I	I	F	D	T	T	L	R	D	G	E	Q	A	L	Q	A	S	L	S	V	K	E	K	L	Q	I	A	L	A	L	E	R	M	G	V	D	V	M	E	V	G	F	.	.	.	.	.	.	.	.	.	P	V	S	S	P	G	D	F	E	S	V	Q	T	I	A	R	Q	V	K	N	S	R	V	C	A
Query Conservation																																																.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.	.														.	.	.										.	.	.	.	.	.	.	.	.																		.
Template Conservation															.	.	.	.	.	.	.	.														.	.	.																																				.
Template Sequence		P	R	N	F	T	L	F	T	G	Q	W	A	D	.	.	.	.	.	.	.	.	L	P	L	E	E	V	C	R	L	A	R	D	F	.	.	.	G	Y	D	G	L	E	L	A	C	W	G	D	H	F	E	V	D	K	A	L	A	D	P	S	Y	V	D	S	R	H	Q	L	L	D	K	.	Y	G	L	K	C	W	A
Template Known Secondary structure										G	G	G	T	T	.	.	.	.	.	.	.	.	S													.	.	.	T		S						S	S	T	T	T										T	T												.	T	T		B		S
Template Predicted Secondary structure															.	.	.	.	.	.	.	.														.	.	.																																				.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.									.	.	.	.	.	.	20	.	.	.	.	.	.				.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.		.	.	.	.	.	.	.
		73	.																																				.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.									.	.	.
Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.
Query SS confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.
Query Sequence		L	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	C	V	E	K	D	I	D	V	A	A	E	S	L	K	V	A	E	A	F	R	I	H	T	F	I	A	T	S	P	M	H	.	.	.	.	.	.	.	.	I	A	T
Query Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	S	N	H	L	V	G	Q	A	V	C	D	A	I	I	D	E	R	H	E	A	I	L	P	A	R	I	W	G	D	G	D	A	E	G	V	R	Q	R	A	A	A	E	I	K	D	T	A	R	A	A	A	R	L	G	V	D	T	V	I	G	F	T	G	S	A	I	W	H	L	V	A	X	F	P	P	A	P	E	S
Template Known Secondary structure														S	S		S							S						T	T																									T											S	S	G	G	G	T	T			S
Template Predicted Secondary structure
Template SS confidence
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.		.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
Predicted Secondary structure																																							.
Query SS confidence																																							.
Query Sequence		K	L	R	S	T	L	D	E	V	I	E	R	A	I	Y	M	V	K	R	A	R	N	Y	T	D	D	V	E	F	S	C	E	D	A	G	R	T	.	P	I	A	D	L	A	R	V	V	E	A	A	I	N	A	G	A	T	T	I	N	I	P	D	T	V	G	Y	T	M	P	F	E	F	A	G	I	I	S	G	L	Y
Query Conservation																																							.
Alig confidence																																							.
Template Conservation
Template Sequence		X	I	E	R	G	Y	Q	D	F	A	D	R	W	N	P	I	L	D	V	F	D	A	E	G	V	R	F	A	H	E	V	H	P	S	E	I	A	Y	D	Y	W	T	T	H	R	A	L	E	A	V	G	H	R	P	A	F	G	L	N	F	D	P	S	H	F	V	W	Q	D	L	D	P	V	G	F	L	W	D	F	R
Template Known Secondary structure																									T									T	T	S	S			S											T	T	T		T	T							T							T										T	G
Template Predicted Secondary structure
Template SS confidence
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	R	V	P	N	I	D	K	A	I	I	S	V	H	T	H	D
Query Conservation
Alig confidence					.	.	.	.	.	.	.
Template Conservation					.	.	.	.	.	.	.
Template Sequence		D	R	I	.	.	.	.	.	.	.	Y	H	V	D	C	K	E
Template Known Secondary structure		G	G		.	.	.	.	.	.	.
Template Predicted Secondary structure					.	.	.	.	.	.	.
Template SS confidence
		229	230	.								.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions