Job Description P09151 Confidence 88.59% Date Thu Jan 5 11:01:59 GMT 2012 Rank 188 Aligned Residues 169 % Identity 11% Template c2x7vA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:probable endonuclease 4; PDBTitle: crystal structure of thermotoga maritima endonuclease iv in2 the presence of zinc Resolution 2.30 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.			.							.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.			.	.	.	.	.	70	.	.	.	.															.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure																		.	.		.	.	.	.	.	.																			.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.	.		.	.	.	.	.	.																			.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	I	A	L	A	L	E	R	M	G	V	D	V	M	E	V	.	.	G	.	.	.	.	.	.	F	P	V	S	S	P	G	D	F	E	S	V	Q	T	I	A	R	Q	.	.	V	K	N	S	R	V	C	A	L	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	C	V	E	K	D	I	D	V	A	A
Query Conservation																		.	.		.	.	.	.	.	.																			.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.		.	.	.	.	.	.																			.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	V	P	Q	D	T	V	N	I	G	G	N	S	F	Q	I	F	P	H	N	A	R	S	W	S	A	K	L	P	S	D	E	A	A	T	K	F	K	R	E	M	K	K	H	G	I	D	W	E	N	A	F	C	H	S	G	Y	L	I	N	L	A	S	P	K	D	D	I	W	Q	K	S	V	E	L	L	K	K	E	V
Template Known Secondary structure		G								T	T		S						S				S	S	S																					T			G	G	G							T	T			T	T		S	S
Template Predicted Secondary structure
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.							.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																															.	.	.	.	.	.
Query SS confidence																																																															.	.	.	.	.	.
Query Sequence		E	S	L	K	V	A	E	A	F	R	I	H	T	F	I	A	T	S	P	M	H	I	A	T	K	L	R	S	T	L	D	E	V	I	E	R	A	I	Y	M	V	K	R	A	R	N	Y	T	D	D	V	E	F	S	C	E	D	A	G	R	T	.	.	.	.	.	.	P	I	A	D	L	A	R	V	V	E	A	A	I
Query Conservation																																																															.	.	.	.	.	.
Alig confidence																					.	.	.	.	.	.	.																																				.	.	.	.	.	.													.
Template Conservation																					.	.	.	.	.	.	.																																																						.
Template Sequence		E	I	C	R	K	L	G	I	R	Y	L	N	I	H	P	G	S	H	L	.	.	.	.	.	.	.	G	T	G	E	E	E	G	I	D	R	I	V	R	G	L	N	E	V	L	N	N	T	E	G	V	V	I	L	L	E	N	V	S	Q	K	G	G	N	I	G	Y	K	L	E	Q	L	K	K	I	R	D	L	V	.
Template Known Secondary structure								T												T	.	.	.	.	.	.	.	T	S																		T	T			S												T	T				S	S												.
Template Predicted Secondary structure																					.	.	.	.	.	.	.																																																						.
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.								.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.								.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.	.	.	.
Query SS confidence														.	.	.	.	.	.	.
Query Sequence		N	A	G	A	T	T	I	N	I	P	D	T	.	.	.	.	.	.	.	V	G	Y	T	M	P	F	E	F	A	G	I	I	S	G	L	Y	E	R	V	P	N	I	D	K	A	I	I	S	V	H	T	H	D	D	L	G
Query Conservation														.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.	.																							.	.
Template Conservation																																											.	.
Template Sequence		D	Q	R	D	R	V	A	I	T	Y	D	T	C	H	G	F	D	S	G	Y	D	I	T	K	K	E	G	V	E	A	L	L	N	E	I	E	S	L	F	G	L	.	.	E	R	L	K	M	I	H	L	N	D	S	K	Y
Template Known Secondary structure		S		G	G	G													T	T			T	T	S															T		G	.	.	G	G										S	S
Template Predicted Secondary structure																																											.	.
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.			.	210	.	.	.	.	.	.	.	.	.	220	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions