Job Description P09151 Confidence 92.98% Date Thu Jan 5 11:01:59 GMT 2012 Rank 122 Aligned Residues 196 % Identity 12% Template c2qw5B_ PDB info PDB header:isomerase Chain: B: PDB Molecule:xylose isomerase-like tim barrel; PDBTitle: crystal structure of a putative sugar phosphate isomerase/epimerase2 (ava4194) from anabaena variabilis atcc 29413 at 1.78 a resolution Resolution 1.78 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.								.	.	.	.	.	60	.	.	.	.			.	.	.	.	.	70	.	.	.	.	.	.	.	.																	.	80
Predicted Secondary structure																															.	.	.	.	.	.	.											.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																															.	.	.	.	.	.	.											.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	E	K	L	Q	I	A	L	A	L	E	R	M	G	V	D	V	M	E	V	G	F	P	V	S	S	P	G	D	.	.	.	.	.	.	.	F	E	S	V	Q	T	I	A	R	Q	.	.	V	K	N	S	R	V	C	A	L	A	R	C	V	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	D
Query Conservation																															.	.	.	.	.	.	.											.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																															.	.	.	.	.	.	.											.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	I	V	V	A	H	I	K	K	L	Q	R	F	G	Y	S	G	F	E	F	P	I	A	P	G	L	P	E	N	Y	A	Q	D	L	E	N	Y	T	N	L	R	H	Y	L	D	S	E	G	L	E	N	V	K	I	S	T	N	V	G	A	T	R	T	F	D	P	S	S	N	Y	P	E	Q	R	Q	E	A	L	E	Y
Template Known Secondary structure														T	T													G	G	G																		T	T	T	T	T											S	S	S		T	T		S	S
Template Predicted Secondary structure
Template SS confidence
		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100															.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	D	V	A	A	E	S	L	K	V	A	E	A	F	R	I	H	T	F	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	T	S	P	M	H	I	A	T	K	L	R	S	T	L	D	E	V	I	E	R	A	I	Y	M	V	K	R	A	R	N	Y	T	D	D	V	E	F	S	C	E	D	A	G	R	T
Query Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	K	S	R	V	D	I	T	A	A	L	G	G	E	I	X	X	G	P	I	V	I	P	Y	G	V	F	P	T	T	D	F	N	E	P	I	W	S	D	E	L	Q	E	H	L	K	V	R	Y	A	N	A	Q	P	I	L	D	K	L	G	E	Y	A	E	I	K	K	V	K	L	A	I	E	P	I	T	H	W	E	T
Template Known Secondary structure												T	T		S							S	S		T	T				B		T	T			B																															T	T										T	T	T
Template Predicted Secondary structure
Template SS confidence
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
		147		.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.		170	.					.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure			.																							.			.	.	.	.
Query SS confidence			.																							.			.	.	.	.
Query Sequence		P	.	I	A	D	L	A	R	V	V	E	A	A	I	N	A	G	A	T	T	I	N	I	P	.	D	T	.	.	.	.	V	G	Y	T	M	P	F	E	F	A	G	I	I	S	G	L	Y	E	R	V	P	N	I	D	K	A	I	I	S	V	H	T	H	D	D	L	G	L	A	V	G	N	S	L	A	A	V	H	A
Query Conservation			.																							.			.	.	.	.
Alig confidence			.																							.			.	.	.	.																				.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																				.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	G	P	N	K	L	S	Q	L	I	E	F	L	K	G	V	K	S	K	Q	V	G	V	V	I	D	S	A	H	E	I	L	D	G	E	G	P	E	I	F	K	T	Q	V	E	Y	L	A	Q	Q	.	.	.	.	.	G	R	L	H	Y	V	Q	V	S	P	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		S	S			S										T				T	T																														T	.	.	.	.	.	T										T	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																				.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.						240	.	.	.	.	.	.	.	.	.	250
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	R	Q	V	E	G	A	M	N	G	I	G	E	R	A	G	N	C	S	L	E	E	V	I	M	A	I	K
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	D	R	G	A	L	H	T	S	W	L	P	W	K	S	F	L	T	P	I	V
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	T	S	S		S	S	S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.
Template SS confidence
											251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions