Job Description P09151 Confidence 59.61% Date Thu Jan 5 11:01:59 GMT 2012 Rank 306 Aligned Residues 158 % Identity 16% Template c2o7qA_ PDB info PDB header:oxidoreductase,transferase Chain: A: PDB Molecule:bifunctional 3-dehydroquinate dehydratase/shikimate PDBTitle: crystal structure of the a. thaliana dhq-dehydroshikimate-sdh-2 shikimate-nadp(h) Resolution 2.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.		.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.									.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
Predicted Secondary structure																										.																														.	.	.	.	.	.	.	.
Query SS confidence																										.																														.	.	.	.	.	.	.	.
Query Sequence		S	V	K	E	K	L	Q	I	A	L	A	L	E	R	M	G	V	D	V	M	E	V	G	F	.	P	V	S	S	P	G	D	F	E	S	V	Q	T	I	A	R	Q	V	K	N	S	R	V	C	A	L	A	R	C	.	.	.	.	.	.	.	.	V	E	K	D	I	D	V	A	A	E	S	L	K	V	A	E	A	F
Query Conservation																										.																														.	.	.	.	.	.	.	.
Alig confidence																										.																														.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	I	D	K	M	V	I	E	T	S	K	A	H	E	L	G	A	D	L	V	E	I	R	L	D	W	L	K	D	F	N	P	L	E	D	L	K	T	I	I	K	K	S	P	L	P	T	L	F	T	Y	R	P	K	W	E	G	G	Q	Y	E	G	D	E	N	E	R	R	D	V	L	R	L	A	M	E	L	G	A	D
Template Known Secondary structure		S															T		S						G	G	G		S	S															S	S								B	G	G	G	T	S	S	B		S															T	T		S
Template Predicted Secondary structure
Template SS confidence
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.		.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure																																																							.
Query SS confidence																																																							.
Query Sequence		R	I	H	T	F	I	A	T	S	P	M	H	I	A	T	K	L	R	S	T	L	D	E	V	I	E	R	A	I	Y	M	V	K	R	A	R	N	Y	T	D	D	V	E	F	S	C	E	D	A	G	R	T	P	.	I	A	D	L	A	R	V	V	E	A	A	I	N	A	G	A	T	T	I	N	I	P	D	T	V	G
Query Conservation																																																							.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.																										.
Template Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																										.
Template Sequence		Y	I	D	V	E	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	V	A	S	E	F	I	K	S	I	D	G	K	K	P	G	K	F	K	V	I	V	S	S	H	N	Y	Q	N	T	P	S	V	E	D	L	D	G	L	V	A	R	I	Q	Q	T	G	A	D	I	V	K	I	A	T	T	A	.
Template Known Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										T	T	T				S	S										S	S																		T	T		S									.
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																										.
Template SS confidence
		184	.	.	.	.	.																	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	T	M	P	F	E	F	A	G	I	I	S	G	L	Y	E	R	V	P	N	I	D	K	A	I	I	S	V
Query Conservation
Alig confidence		.																.	.
Template Conservation		.																.	.
Template Sequence		.	V	D	I	A	D	V	A	R	M	F	H	I	T	S	K	.	.	A	Q	V	P	T	I	G	L	V	M
Template Known Secondary structure		.	S	S	G	G	G											.	.		S	S
Template Predicted Secondary structure		.																.	.
Template SS confidence
			247	.	.	250	.	.	.	.	.	.	.	.	.	260	.			.	.	.	.	.	.	.	.	270	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions