Job Description P09151 Confidence 100.00% Date Thu Jan 5 11:01:59 GMT 2012 Rank 18 Aligned Residues 307 % Identity 17% Template c2nx9B_ PDB info PDB header:lyase Chain: B: PDB Molecule:oxaloacetate decarboxylase 2, subunit alpha; PDBTitle: crystal structure of the carboxyltransferase domain of the2 oxaloacetate decarboxylase na+ pump from vibrio cholerae Resolution 1.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.									50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure																			.																															.	.	.	.	.	.	.	.
Query SS confidence																			.																															.	.	.	.	.	.	.	.
Query Sequence		Q	Q	V	I	I	F	D	T	T	L	R	D	G	E	Q	A	L	.	Q	A	S	L	S	V	K	E	K	L	Q	I	A	L	A	L	E	R	M	G	V	D	V	M	E	V	G	F	P	V	.	.	.	.	.	.	.	.	S	S	P	G	D	F	E	S	V	Q	T	I	A	R	Q	V	K	N	S	R	V	C	A	L
Query Conservation																			.																															.	.	.	.	.	.	.	.
Alig confidence																			.																															.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	R	V	G	V	T	D	V	V	L	R	D	A	H	Q	S	L	F	A	T	R	L	R	I	D	D	M	L	P	I	A	Q	Q	L	D	Q	I	G	Y	W	S	L	E	C	W	G	G	A	T	F	D	S	C	I	R	F	L	G	E	D	P	W	Q	R	L	R	L	L	K	Q	A	M	P	N	T	P	L	Q	M	L
Template Known Secondary structure										T	T	T							S	T	T								T	T	T						T	S			S							T	T									T																T	T	S
Template Predicted Secondary structure
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		74	.	.										.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.			.	.	140	.	.
Predicted Secondary structure					.	.	.	.	.	.	.	.	.																																																														.	.
Query SS confidence					.	.	.	.	.	.	.	.	.																																																														.	.
Query Sequence		A	R	C	.	.	.	.	.	.	.	.	.	V	E	K	D	I	D	V	A	A	E	S	L	K	V	A	E	A	F	R	I	H	T	F	I	A	T	S	P	M	H	I	A	T	K	L	R	S	T	L	D	E	V	I	E	R	A	I	Y	M	V	K	R	A	R	N	Y	T	D	D	V	E	.	.	F	S	C	E	D
Query Conservation					.	.	.	.	.	.	.	.	.																																																														.	.
Alig confidence					.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.
Template Conservation																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	R	G	Q	N	L	L	G	Y	R	H	Y	A	D	D	V	V	D	T	F	V	E	R	A	V	K	N	G	M	D	V	F	R	V	F	D	A	M	N	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	R	N	M	Q	Q	A	L	Q	A	V	K	K	M	G	A	H	A	Q	G	T	L	C	Y	T	T
Template Known Secondary structure				G	G	G	T	T	S	S	S																		T									T	T			.	.	.	.	.	.	.	.	.	.	.	.	.	.															T
Template Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.															.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	R	T	P	I	A	D	L	A	R	V	V	E	A	A	I	N	A	G	A	T	T	I	N	I	P	D	T	V	G	Y	T	M	P	F	E	F	A	G	I	I	S	G	L	Y	E	R	V	P	N	I	D	K	A	I	I	S	V	H	T	H	D	D	L	G	L	A	V	G	N	S	L	A	A	V	H	A	G	A
Query Conservation
Alig confidence																																																			.	.	.	.
Template Conservation																																																			.	.	.	.
Template Sequence		S	P	V	H	N	L	Q	T	W	V	D	V	A	Q	Q	L	A	E	L	G	V	D	S	I	A	L	K	D	M	A	G	I	L	T	P	Y	A	A	E	E	L	V	S	T	L	K	K	Q	V	.	.	.	.	D	V	E	L	H	L	H	C	H	S	T	A	G	L	A	D	M	T	L	L	K	A	I	E	A	G	V
Template Known Secondary structure			T	T																T	T		S							S	S	S																		S	.	.	.	.		S									T	T	S												T	T
Template Predicted Secondary structure																																																			.	.	.	.
Template SS confidence
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200					.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	Q	V	E	G	A	M	N	G	I	G	E	R	A	G	N	C	S	L	E	E	V	I	M	A	I	K	V	R	K	D	I	L	N	V	H	T	A	I	N	H	Q	E	I	W	R	T	S	Q	L	V	S	Q	I	C	N	M	P	I	P	A	N	K	A	I	V	G	S	G	A	F	A	H	S	S	G	I	H	Q	D
Query Conservation
Alig confidence																												.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																												.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	R	V	D	T	A	I	S	S	M	S	G	T	Y	G	H	P	A	T	E	S	L	V	A	T	L	.	.	.	.	Q	G	T	G	Y	D	T	G	L	D	I	A	K	L	E	Q	I	A	A	Y	F	R	D	V	R	K	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		S					B		G	G	G		S	T	T	S			B									.	.	.	.	T	T	S	T	T																						T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																												.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.					.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
		303	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.			.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.
Predicted Secondary structure																																	.	.
Query SS confidence																																	.	.
Query Sequence		G	V	L	K	N	R	E	N	Y	E	I	M	T	P	E	S	I	G	L	N	Q	I	Q	L	N	L	T	S	R	S	G	.	.	R	A	A	V	K	H	R	M	D	E	M	G	Y	K	E	S	E	Y	N	L	D	N	L	Y	D	A	F	L	K	L
Query Conservation																																	.	.
Alig confidence		.	.	.	.	.	.	.	.											.													.	.
Template Conservation		.	.	.	.	.	.	.	.											.
Template Sequence		.	.	.	.	.	.	.	.	Y	H	A	F	E	G	M	M	K	G	.	S	D	A	R	I	L	V	A	Q	V	P	G	G	M	L	T	N	M	E	S	Q	L	K	Q	Q	N	A	L	D	K	L	D	L	V	L	E	E	I	P	R	V	R	E	E
Template Known Secondary structure		.	.	.	.	.	.	.	.	T	G	G	G						S	.			T																					T	T	S		G	G	G
Template Predicted Secondary structure		.	.	.	.	.	.	.	.											.
Template SS confidence
										281	.	.	.	.	.	.	.	.	290		.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions