Return to main results Retrieve Phyre Job Id

Job DescriptionP09151
Confidence89.97%DateThu Jan 5 11:01:59 GMT 2012
Rank168Aligned Residues134
% Identity9%Templatec2infB_
PDB info PDB header:lyaseChain: B: PDB Molecule:uroporphyrinogen decarboxylase; PDBTitle: crystal structure of uroporphyrinogen decarboxylase from2 bacillus subtilis
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   25....30.........40........ .50........ .60...... ...70.........80.........90....
Predicted Secondary structure 





...




.....

..








Query SS confidence 























. . .









. . . . .







. .



























Query Sequence  VKEKLQIALALERMGVDVMEVGFP. . . VSSPGDFESV. . . . . QTIARQVK. . NSRVCALARCVEKDIDVAAESLKVAEAF
Query Conservation   
 

 

  
   

  



 
... 

  
 
 
.....  
     ..   
 

 
    


 
 


   
  
Alig confidence 























...









.....







..













....









Template Conservation 
            



 
 
 
     


  
 
   
  
 
   
   
  

         ....
      
  
Template Sequence  ADMIIVYVKAQIKAGAKAIQIFDSWVGALNQADYRTYIKPVMNRIFSELAKENVPLIMFGVGASHL. . . . AGDWHDLPLD
Template Known Secondary structure  T
S
TTGGGS
TTT
S

TT
GGG....TSS
S
Template Predicted Secondary structure 




















....



Template SS confidence 















































































   186...190.........200.........210.........220.........230.........240.........250. ........260.
 
   95....100.........110 .........120......... 130.........140.........150.........
Predicted Secondary structure 


..............


.










Query SS confidence 















. . . . . . . . . . . . . .


















.





























Query Sequence  RIHTFIATSPMHIATK. . . . . . . . . . . . . . LRSTLDEVIERAIYMVKRA. RNYTDDVEFSCEDAGRTPIADLARVVEAAI
Query Conservation   
 
    

 
    ..............   
 

        
  
.
  
  
    

  
   
 
      
 
Alig confidence 















..............


















.





























Template Conservation   
  
    
  

       
 




 

 

 


       
       



  

 
   

 


 
 
 

 
Template Sequence  VVGLDWRLGIDEARSKGITKTVQGNLDPSILLAPWEVIEQKTKEILDQGMESDGFIFNLGHGVFPDVSPEVLKKLTAFVH
Template Known Secondary structure 

TTS
TT

S

B
GGGGGS
TTSS
B
BSS


TT

Template Predicted Secondary structure 





























Template SS confidence 















































































   262.......270.........280.........290.........300.........310.........320.........330.........340.
 
   160..
Predicted Secondary structure 

Query SS confidence 


Query Sequence  NAG
Query Conservation    
Alig confidence 


Template Conservation   
 
Template Sequence  EYS
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 


   342..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions