Job Description P09151 Confidence 100.00% Date Thu Jan 5 11:01:59 GMT 2012 Rank 8 Aligned Residues 278 % Identity 23% Template c2ftpA_ PDB info PDB header:lyase Chain: A: PDB Molecule:hydroxymethylglutaryl-coa lyase; PDBTitle: crystal structure of hydroxymethylglutaryl-coa lyase from pseudomonas2 aeruginosa Resolution 2.40 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.						.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure																																																						.	.	.	.	.
Query SS confidence																																																						.	.	.	.	.
Query Sequence		M	S	Q	Q	V	I	I	F	D	T	T	L	R	D	G	E	Q	A	L	Q	A	S	L	S	V	K	E	K	L	Q	I	A	L	A	L	E	R	M	G	V	D	V	M	E	V	G	F	P	V	S	S	P	.	.	.	.	.	G	D	F	E	S	V	Q	T	I	A	R	Q	V	K	N	S	R	V	C	A	L	A	R
Query Conservation																																																						.	.	.	.	.
Alig confidence																																																						.	.	.	.	.
Template Conservation
Template Sequence		L	P	K	K	V	R	L	V	E	V	G	P	R	D	G	L	Q	N	E	K	Q	P	I	E	V	A	D	K	I	R	L	V	D	D	L	S	A	A	G	L	D	Y	I	E	V	G	S	F	V	S	P	K	W	V	P	Q	M	A	G	S	A	E	V	F	A	G	I	R	Q	R	P	G	V	T	Y	A	A	L	A	P
Template Known Secondary structure				S	B							T	T	T					T	S	S	S																	T	T		S								S		T	T	T		G	G	G	T	T								S				T	T	S
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.							.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																.	.	.	.	.	.
Query SS confidence																																																																.	.	.	.	.	.
Query Sequence		C	V	E	K	D	I	D	V	A	A	E	S	L	K	V	A	E	A	F	R	I	H	T	F	I	A	T	S	P	M	H	I	A	T	K	L	R	S	T	L	D	E	V	I	E	R	A	I	Y	M	V	K	R	A	R	N	Y	T	D	D	V	E	.	.	.	.	.	.	F	S	C	E	D	A	G	R	T	P	I	A
Query Conservation																																																																.	.	.	.	.	.
Alig confidence					.								.	.	.	.																																																.	.	.	.	.	.
Template Conservation					.								.	.	.	.
Template Sequence		N	L	K	.	G	F	E	A	A	L	E	.	.	.	.	S	G	V	K	E	V	A	V	F	A	A	A	S	E	A	F	S	Q	R	N	I	N	C	S	I	K	D	S	L	E	R	F	V	P	V	L	E	A	A	R	Q	H	Q	V	R	V	R	G	Y	I	S	C	V	L	G	C	P	Y	D	G	D	V	D	P	R
Template Known Secondary structure		S			.								.	.	.	.	T	T										S										S	S																			T	T										T	T		B	T	T	T	B
Template Predicted Secondary structure					.								.	.	.	.
Template SS confidence
		83	.	.		.	.	.	.	90	.	.					.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	L	A	R	V	V	E	A	A	I	N	A	G	A	T	T	I	N	I	P	D	T	V	G	Y	T	M	P	F	E	F	A	G	I	I	S	G	L	Y	E	R	V	P	N	I	D	K	A	I	I	S	V	H	T	H	D	D	L	G	L	A	V	G	N	S	L	A	A	V	H	A	G	A	R	Q	V	E	G	A	M
Query Conservation
Alig confidence																																													.	.	.
Template Conservation																																													.	.	.
Template Sequence		Q	V	A	W	V	A	R	E	L	Q	Q	M	G	C	Y	E	V	S	L	G	D	T	I	G	V	G	T	A	G	A	T	R	R	L	I	E	A	V	A	S	E	V	P	.	.	.	R	E	R	L	A	G	H	F	H	D	T	Y	G	Q	A	L	A	N	I	Y	A	S	L	L	E	G	I	A	V	F	D	S	S	V
Template Known Secondary structure													T	T		S							S	S	S															T	T	T	S		.	.	.	G	G	G						B		T	T	S												T	T							B	G
Template Predicted Secondary structure																																													.	.	.
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200				.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
		230	.	.	.							.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.			.	.	.	.	.	290
Predicted Secondary structure						.	.	.	.	.	.																																																				.	.
Query SS confidence						.	.	.	.	.	.																																																				.	.
Query Sequence		N	G	I	G	.	.	.	.	.	.	E	R	A	G	N	C	S	L	E	E	V	I	M	A	I	K	V	R	K	D	I	L	N	V	H	T	A	I	N	H	Q	E	I	W	R	T	S	Q	L	V	S	Q	I	C	N	M	P	I	P	A	N	.	.	K	A	I	V	G	S
Query Conservation						.	.	.	.	.	.																																																				.	.
Alig confidence						.	.	.	.	.	.																	.	.	.	.																																.	.
Template Conservation																												.	.	.	.
Template Sequence		A	G	L	G	G	C	P	Y	A	K	G	A	T	G	N	V	A	S	E	D	V	L	Y	L	L	N	.	.	.	.	G	L	E	I	H	T	G	V	D	M	H	A	L	V	D	A	G	Q	R	I	C	A	V	L	G	K	S	N	G	S	R	A	A	K	A	L	L	A	K
Template Known Secondary structure		G	G			B		G	G	G	T	T		B		B		B										.	.	.	.		T	T		B																								S
Template Predicted Secondary structure																												.	.	.	.
Template SS confidence
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260					.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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