Job Description P09151 Confidence 93.21% Date Thu Jan 5 11:01:59 GMT 2012 Rank 115 Aligned Residues 266 % Identity 14% Template c2ehhE_ PDB info PDB header:lyase Chain: E: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: crystal structure of dihydrodipicolinate synthase from2 aquifex aeolicus Resolution 1.90 Å

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		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.						.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.				.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure																											.	.	.	.	.																			.	.	.
Query SS confidence																											.	.	.	.	.																			.	.	.
Query Sequence		S	L	S	V	K	E	K	L	Q	I	A	L	A	L	E	R	M	G	V	D	V	M	E	V	G	.	.	.	.	.	F	P	V	S	S	P	G	D	F	E	S	V	Q	T	I	A	R	Q	.	.	.	V	K	N	S	R	V	C	A	L	A	R	C	V	E	K	D	I	D	V	A	A	E	S	L	K	V	A	E	A
Query Conservation																											.	.	.	.	.																			.	.	.
Alig confidence																											.	.	.	.	.																			.	.	.
Template Conservation
Template Sequence		E	V	D	Y	E	A	L	G	N	L	I	E	F	H	V	D	N	G	T	D	A	I	L	V	C	G	T	T	G	E	S	P	T	L	T	F	E	E	H	E	K	V	I	E	F	A	V	K	R	A	A	G	R	I	K	V	I	A	G	T	G	G	N	A	T	H	E	A	V	H	L	T	A	H	A	K	E	V	G	A
Template Known Secondary structure																	T	T	T		S					S	S	T	T	T	T	G	G	G	S																	T	T	S	S									S															T	T
Template Predicted Secondary structure
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	R	I	H	T	F	I	A	T	S	P	M	H	I	A	T	K	L	R	S	T	L	D	E	V	I	E	R	A	I	Y	M	V	K	R	A	R	N	Y	T	D	D	V	E	F	S	C	E	D	A	G	R	T	P	I	A	D	L	A	R	V	V	E	A	A	I	N	A	G	A	T	T	I	N	I	P	D	T	V	G
Query Conservation
Alig confidence												.	.	.	.	.	.	.																				.	.																				.	.
Template Conservation												.	.	.	.	.	.	.																				.	.																				.	.
Template Sequence		D	G	A	L	V	V	V	P	Y	Y	.	.	.	.	.	.	.	N	K	P	T	Q	R	G	L	Y	E	H	F	K	T	V	A	Q	E	V	.	.	D	I	P	I	I	I	Y	N	I	P	S	R	T	C	V	E	I	S	V	.	.	D	T	M	F	K	L	A	S	E	C	E	N	I	V	A	S	K	E	S	T	P
Template Known Secondary structure		S									S	.	.	.	.	.	.	.	S																			.	.		S												S						.	.											T	T									S
Template Predicted Secondary structure												.	.	.	.	.	.	.																				.	.																				.	.
Template SS confidence
		97	.	.	100	.	.	.	.	.	.								.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.			.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.			.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	T	M	P	F	E	F	A	G	I	I	S	G	L	Y	E	R	V	P	N	I	D	K	A	I	I	S	V	H	T	H	D	D	L	G	L	A	V	G	N	S	L	A	A	V	H	A	G	A	R	Q	V	E	G	A	M	N	G	I	G	E	R	A	G	N	C	S	L	E	E	V	I	M	A	I	K	V	R	K	D
Query Conservation
Alig confidence		.	.																.	.	.	.	.	.	.	.												.	.	.	.	.										.	.	.							.	.	.	.
Template Conservation		.	.																.	.	.	.	.	.	.	.												.	.	.	.	.										.	.	.							.	.	.	.
Template Sequence		.	.	N	M	D	R	I	S	E	I	V	K	R	L	G	E	S	.	.	.	.	.	.	.	.	F	S	V	L	S	G	D	D	S	L	T	.	.	.	.	.	L	P	M	M	A	L	G	A	K	.	.	.	G	V	I	S	V	A	.	.	.	.	N	N	V	M	P	R	E	V	K	E	L	I	R	A	A	L	E
Template Known Secondary structure		.	.												S		T	T	.	.	.	.	.	.	.	.						S		G	G	G		.	.	.	.	.						T	T			.	.	.					S	G	.	.	.	.	G	G	T														T
Template Predicted Secondary structure		.	.																.	.	.	.	.	.	.	.												.	.	.	.	.										.	.	.							.	.	.	.
Template SS confidence
				166	.	.	.	170	.	.	.	.	.	.	.	.	.	180									.	.	.	.	.	.	.	.	.	190	.						.	.	.	.	.	.	.	.	200				.	.	.	.	.	.					.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.			.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.
Predicted Secondary structure																																																									.	.
Query SS confidence																																																									.	.
Query Sequence		I	L	N	V	H	T	A	I	N	H	Q	E	I	W	R	T	S	Q	L	V	S	Q	I	C	N	M	P	I	P	A	N	K	A	I	V	G	S	G	A	F	A	H	S	S	G	I	H	Q	D	G	V	L	K	N	R	.	.	E	N	Y	E	I	M	T	P	E	S	I	G	L	N	Q	I	Q	L	N	L	T	S	R
Query Conservation																																																									.	.
Alig confidence			.	.	.	.	.	.	.																												.	.	.	.	.	.															.	.											.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation			.	.	.	.	.	.	.																												.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	.	.	.	.	.	.	.	D	F	R	R	A	R	E	I	H	Y	Y	L	H	D	L	F	K	V	L	F	I	E	T	N	P	I	P	.	.	.	.	.	.	V	K	T	A	C	W	M	L	G	M	C	E	K	E	F	R	L	P	L	T	E	M	S	P	E	N	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		T	.	.	.	.	.	.	.																			T	T	S	S	S	T	T			.	.	.	.	.	.								T	T	S	S		S				T	T									.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure			.	.	.	.	.	.	.																												.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		224								.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.							.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
		332	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	G	R	A	A	V	K	H	R	M	D	E	M	G	Y	K	E
Query Conservation
Alig confidence		.	.
Template Conservation		.	.
Template Sequence		.	.	E	N	K	L	R	E	V	L	K	K	Y	N	L	P	L
Template Known Secondary structure		.	.											T	T
Template Predicted Secondary structure		.	.
Template SS confidence
				278	.	280	.	.	.	.	.	.	.	.	.	290	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions