Job Description P09151 Confidence 100.00% Date Thu Jan 5 11:01:59 GMT 2012 Rank 1 Aligned Residues 485 % Identity 24% Template c1sr9A_ PDB info PDB header:transferase Chain: A: PDB Molecule:2-isopropylmalate synthase; PDBTitle: crystal structure of leua from mycobacterium tuberculosis Resolution 2.00 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.				.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																																																																				.	.	.
Query SS confidence																																																																				.	.	.
Query Sequence		M	S	Q	Q	V	I	I	F	D	T	T	L	R	D	G	E	Q	A	L	Q	A	S	L	S	V	K	E	K	L	Q	I	A	L	A	L	E	R	M	G	V	D	V	M	E	V	G	F	P	V	S	S	P	G	D	F	E	S	V	Q	T	I	A	R	Q	V	K	.	.	.	N	S	R	V	C	A	L	A	R	C	V
Query Conservation																																																																				.	.	.
Alig confidence																																																																				.	.	.
Template Conservation
Template Sequence		I	D	R	A	P	L	W	C	A	V	D	L	R	D	G	N	Q	A	L	I	D	P	X	S	P	A	R	K	R	R	X	F	D	L	L	V	R	X	G	Y	K	E	I	E	V	G	F	P	S	A	S	Q	T	D	F	D	F	V	R	E	I	I	E	Q	G	A	I	P	D	D	V	T	I	Q	V	L	T	Q	C	R
Template Known Secondary structure				S								T	T	T					T		S	S																		T		S							T	T	T														T	T		S		T	T									S
Template Predicted Secondary structure
Template SS confidence
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.								.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure																																																										.	.	.	.	.	.	.
Query SS confidence																																																										.	.	.	.	.	.	.
Query Sequence		E	K	D	I	D	V	A	A	E	S	L	K	V	A	E	A	F	R	I	H	T	F	I	A	T	S	P	M	H	I	A	T	K	L	R	S	T	L	D	E	V	I	E	R	A	I	Y	M	V	K	R	A	R	N	Y	T	.	.	.	.	.	.	.	D	D	V	E	F	S	C	E	D	A	G	R	T	P	I	A	D
Query Conservation																																																										.	.	.	.	.	.	.
Alig confidence																																																										.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	E	L	I	E	R	T	F	Q	A	C	S	G	A	P	R	A	I	V	H	F	Y	N	S	T	S	I	L	Q	R	R	V	V	F	R	A	N	R	A	E	V	Q	A	I	A	T	D	G	A	R	K	C	V	E	Q	A	A	K	Y	P	G	T	Q	W	R	F	E	Y	S	P	E	S	Y	T	G	T	E	L	E	Y
Template Known Secondary structure													T	T		S																		T	S																									S		S	S										T	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.							.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.
Query Sequence		L	A	R	V	V	E	A	A	I	N	A	G	A	T	T	.	.	.	.	.	.	I	N	I	P	D	T	V	G	Y	T	M	P	F	E	F	A	G	I	I	S	G	L	Y	E	R	V	P	N	I	D	K	A	I	I	S	V	H	T	H	D	D	L	G	L	A	V	G	N	S	L	A	A	V	H	A	G	A	R	Q
Query Conservation																	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.
Template Conservation
Template Sequence		A	K	Q	V	C	D	A	V	G	E	V	I	A	P	T	P	E	R	P	I	I	F	N	L	P	A	T	V	E	X	T	T	P	N	V	Y	A	D	S	I	E	W	X	S	R	N	L	A	N	R	E	S	V	I	L	S	L	H	P	H	N	D	R	G	T	A	V	A	A	A	E	L	G	F	A	A	G	A	D	R
Template Known Secondary structure																B	T	T	B									S	S			S																S	S	S	G	G	G								B		T	T	S												T	T
Template Predicted Secondary structure
Template SS confidence
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	E	G	A	M	N	G	I	G	E	R	A	G	N	C	S	L	E	E	V	I	M	A	I	K	V	R	K	D	I	L	N	V	H	T	A	I	N	H	Q	E	I	W	R	T	S	Q	L	V	S	Q	I	C	N	M	P	I	P	A	N	K	A	I	V	G	S	G	A	F	A	H	S	S	G	I	H	Q	D	G	V
Query Conservation
Alig confidence																													.	.	.	.
Template Conservation																													.	.	.	.
Template Sequence		I	E	G	C	L	F	G	N	G	E	R	T	G	N	V	C	L	V	T	L	G	L	N	L	F	S	R	.	.	.	.	G	V	D	P	Q	I	D	F	S	N	I	D	E	I	R	R	T	V	E	Y	C	N	Q	L	P	V	H	E	R	H	P	Y	G	G	D	L	V	Y	T	A	F	S	G	S	H	Q	D	A	I
Template Known Secondary structure					B	G	G	G		S	S	T	T		B		B										T	T	.	.	.	.	T				S	S			T	T													S					T	T		T	T	T	S	T	T	T	T
Template Predicted Secondary structure																													.	.	.	.
Template SS confidence
		308	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.					.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.
		305	.	.	.	.	310																					.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.
Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	K	N	R	E	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	E	I	M	T	P	E	S	I	G	L	N	Q	I	Q	L	N	L	T	S	R	S	G	R	A	A	V	K	H	R	M	D	E	M	G	Y	K	E	S	E	Y	N	L	D	N	L	Y	D	A	F	L	K	L	A
Query Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.							.	.										.	.
Template Conservation																																							.							.	.										.	.
Template Sequence		N	K	G	L	D	A	X	K	L	D	A	D	A	A	D	C	D	V	D	D	X	L	W	Q	V	P	Y	L	P	I	D	P	R	D	V	G	R	.	T	Y	E	A	V	I	.	.	K	G	G	V	A	Y	I	X	K	.	.	T	D	H	G	L	S	L	P	R	R	L	Q	I	E	F	S	Q	V	I	Q	K	I	E
Template Known Secondary structure															T	T			G	G	G	S					T	T		S	S		G	G	G	G	T		.							.	.										.	.																					T
Template Predicted Secondary structure																																							.							.	.										.	.
Template SS confidence
		384	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420		.	.	.	.	.	.			.	.	.	430	.	.	.	.	.			.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.
		365	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	K	K	G	Q	V	F	D	Y	D	L	E	A	L	A	F	I	G	K	Q	Q	E	E	P	E	H	F	R	L	D	Y	F	S	V	Q	S	G	S	N	D	I	A	T	A	A	V	K	L	A	C	G	E	E	V	K	A	E	A	A	N	G	N	G	P	V	D	A	V	Y	Q	A	I	N	R	I	T	E	Y	N	V
Query Conservation
Alig confidence						.	.	.	.																																																																				.
Template Conservation						.	.	.	.																																																																				.
Template Sequence		V	S	P	K	.	.	.	.	E	X	W	D	A	F	A	E	E	Y	L	A	P	V	R	P	L	E	R	I	R	Q	H	V	D	A	A	D	D	D	G	G	T	T	S	I	T	A	T	V	K	I	N	G	V	E	T	E	I	S	G	S	G	N	G	P	L	A	A	F	V	H	A	L	A	D	V	.	G	F	D	V
Template Known Secondary structure						.	.	.	.											T	S			S	S												S	S	T	T												T	T										S	S											T	T	.	T
Template Predicted Secondary structure						.	.	.	.																																																																				.
Template SS confidence
		475	.	.	.					.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.		.	.	.	.
		445	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.		.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																													.
Query SS confidence																													.
Query Sequence		E	L	V	K	Y	S	L	T	A	K	G	H	G	K	D	A	L	G	Q	V	D	I	V	A	N	Y	N	.	G	R	R	F	H	G	V	G	L	A	T	D	I	V	E	S	S	A	K	A	M	V	H	V	L	N	N	I
Query Conservation																													.
Alig confidence																													.
Template Conservation
Template Sequence		A	V	L	D	Y	Y	E	H	A	X	S	A	G	D	D	A	Q	A	A	A	Y	V	E	A	S	V	T	I	S	K	T	V	W	G	V	G	I	A	P	S	I	T	T	A	S	L	R	A	V	V	S	A	V	N	R	A
Template Known Secondary structure											S	S	S	S	T	T																								S	S
Template Predicted Secondary structure
Template SS confidence
		550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.