Job Description P09151 Confidence 48.93% Date Thu Jan 5 11:01:59 GMT 2012 Rank 355 Aligned Residues 174 % Identity 14% Template c1k97A_ PDB info PDB header:ligase Chain: A: PDB Molecule:argininosuccinate synthase; PDBTitle: crystal structure of e. coli argininosuccinate synthetase in complex2 with aspartate and citrulline Resolution 2.00 Å

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		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.																														.	.
Predicted Secondary structure																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	V	K	R	A	R	N	Y	T	D	D	V	E	F	S	C	E	D	A	G	R	T	P	I	A	D	L	A	R	V	V	E	A	A	I	N	A	G	A	T	T	I	N	I	P	D	T	V	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	T
Query Conservation																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	L	L	W	M	R	Q	K	G	A	V	P	Y	A	Y	T	A	N	L	G	Q	P	D	E	E	D	Y	D	A	I	P	R	R	A	M	E	Y	G	A	E	N	A	R	L	I	D	C	R	K	Q	L	V	A	E	G	I	A	A	I	Q	C	G	A	F	H	N	T	T	G	G	L	T	Y	F	N	T	T	P	L	G
Template Known Secondary structure									T	T													T	T		S		T	T									T	T		S																						T							T	T
Template Predicted Secondary structure
Template SS confidence
		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	P	F	E	F	A	G	I	I	S	G	L	Y	E	R	V	P	N	I	D	K	A	I	I	S	V	H	T	H	D	D	L	G	L	A	V	G	N	S	L	A	A	V	H	A	G	A	R	Q	V	E	G	A	M	N	G	I	G	E	R	A	G	N	C	S	L	E	E	V	I	M	A	I	K	V	R	K	D	I	L
Query Conservation
Alig confidence																	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	A	V	T	G	T	M	L	V	A	A	M	K	E	D	.	.	.	.	.	G	V	N	I	W	G	D	G	S	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	K	G	N	D	I	E	R	F	Y	R	Y	G	L	L	T	N	A	E	L	Q
Template Known Secondary structure																T	.	.	.	.	.	T										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	S	S														T	T
Template Predicted Secondary structure																	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120						.	.	.	.	.	.	.	.	.	130																														.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
		256	.	.	.	260	.	.	.	.	.	.						.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.			.	.	.	.	.	290	.				.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.						.	.	.	.	.	320
Predicted Secondary structure													.	.	.	.	.																			.	.								.	.	.																								.	.	.	.	.
Query SS confidence													.	.	.	.	.																			.	.								.	.	.																								.	.	.	.	.
Query Sequence		N	V	H	T	A	I	N	H	Q	E	I	.	.	.	.	.	W	R	T	S	Q	L	V	S	Q	I	C	N	M	P	I	P	A	N	.	.	K	A	I	V	G	S	G	.	.	.	A	F	A	H	S	S	G	I	H	Q	D	G	V	L	K	N	R	E	N	Y	E	I	M	.	.	.	.	.	T	P	E	S	I	G
Query Conservation													.	.	.	.	.																			.	.								.	.	.																								.	.	.	.	.
Alig confidence													.	.	.	.	.																			.	.								.	.	.									.															.	.	.	.	.
Template Conservation																																																								.
Template Sequence		I	Y	K	P	W	L	D	T	D	F	I	D	E	L	G	G	R	H	E	M	S	E	F	M	I	A	C	G	F	D	Y	K	M	S	V	E	K	A	Y	S	T	D	S	N	M	L	G	A	T	H	E	A	K	D	.	L	E	Y	L	N	S	S	V	K	I	V	N	P	I	M	G	V	K	F	W	D	E	S	V	K
Template Known Secondary structure					G	G	G								S		S											T	T										S	S						S	S						S	G	G	.	G	G	S	T	T			G	G	G				S	S	S			T	T	S	T	T	S
Template Predicted Secondary structure																																																								.
Template SS confidence
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.		.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
		321	.	.	.	.	.	.	.	.	330	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	N	Q	I	Q	L	N	L	T	S	R	S	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	P	A	E	E	V	T	V	R	F	E	Q	G
Template Known Secondary structure													T	T
Template Predicted Secondary structure
Template SS confidence
		231	.	.	.	.	.	.	.	.	240	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions