Job Description P22564 Confidence 100.00% Date Thu Jan 5 11:38:58 GMT 2012 Rank 1 Aligned Residues 300 % Identity 38% Template c3b9xA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:pyrimidine-specific ribonucleoside hydrolase rihb; PDBTitle: crystal structure of the e. coli pyrimidine nucleoside hydrolase yeik2 in complex with inosine Resolution 2.30 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	P	I	F	L	D	T	D	P	G	I	D	D	A	V	A	I	A	A	A	I	F	A	P	E	L	D	L	Q	L	M	T	T	V	A	G	N	V	S	V	E	K	T	T	R	N	A	L	Q	L	L	H	F	W	N	A	E	I	P	L	A	Q	G	A	A	V	P	L	V	R	A	P	R	D	A	A	S	V	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	R	K	I	I	L	D	C	D	P	G	H	D	D	A	I	A	I	M	M	A	A	K	H	P	A	I	D	L	L	G	I	T	I	V	A	G	N	Q	T	L	D	K	T	L	I	N	G	L	N	V	C	Q	K	L	E	I	N	V	P	V	Y	A	G	M	P	Q	P	I	M	R	Q	Q	I	V	A	D	N	I	H
Template Known Secondary structure																										T	T										S	S	S	S																T	T										S	S		S	S	S
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	E	S	G	M	A	G	Y	D	F	V	E	H	N	R	K	P	L	G	I	P	A	F	L	A	I	R	D	A	L	M	R	A	P	E	P	V	T	L	V	A	I	G	P	L	T	N	I	A	L	L	L	S	Q	C	P	E	C	K	P	Y	I	R	R	L	V	I	M	G	G	S	A	G	R	G	N	C	T	P	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	D	T	G	L	D	G	P	V	F	E	P	L	T	R	Q	A	E	S	T	H	A	V	K	Y	I	I	D	T	L	M	A	S	D	G	D	I	T	L	V	P	V	G	P	L	S	N	I	A	V	A	M	R	M	Q	P	A	I	L	P	K	I	R	E	I	V	L	M	G	G	A	Y	G	T	G	N	F	T	P	S
Template Known Secondary structure		T	T	T	S	S		S												S	S													S		S								S		S											G	G	G	T	T	T											S	S			S	S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.						210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure																																																		.	.	.	.	.
Query SS confidence																																																		.	.	.	.	.
Query Sequence		A	E	F	N	I	A	A	D	P	E	A	A	A	C	V	F	R	S	G	I	E	I	V	M	C	G	L	D	V	T	N	Q	A	I	L	T	P	D	Y	L	S	T	L	P	Q	L	N	R	.	.	.	.	.	T	G	K	M	L	H	A	L	F	S	H	Y	R	S	G	S	M	Q	S	G	L	R	M	H	D	L	C
Query Conservation																																																		.	.	.	.	.
Alig confidence																																																		.	.	.	.	.
Template Conservation
Template Sequence		A	E	F	N	I	F	A	D	P	E	A	A	R	V	V	F	T	S	G	V	P	L	V	M	M	G	L	D	L	T	N	Q	T	V	C	T	P	D	V	I	A	R	M	E	R	A	G	G	P	A	G	E	L	F	S	D	I	M	N	F	T	L	K	T	Q	F	E	N	Y	G	L	A	G	G	P	V	H	D	A	T
Template Known Secondary structure								T										T	S		S											G	G	G																																							S	S				T	T
Template Predicted Secondary structure
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	I	A	W	L	V	R	P	D	L	F	T	L	K	P	C	F	V	A	V	E	T	Q	G	E	F	T	S	G	T	T	V	V	D	I	D	G	C	L	G	K	P	A	N	V	Q	V	A	L	D	L	D	V	K	G	F	Q	Q	W	V	A	E	V	L	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		C	I	G	Y	L	I	N	P	D	G	I	K	T	Q	E	M	Y	V	E	V	D	V	N	S	G	P	C	Y	G	R	T	V	C	D	E	L	G	V	L	G	K	P	A	N	T	K	V	G	I	T	I	D	T	D	W	F	W	G	L	V	E	E	C	V	R
Template Known Secondary structure									G	G	G														S	S	T	T	T	T						T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions