Job Description P22564 Confidence 34.12% Date Thu Jan 5 11:38:58 GMT 2012 Rank 21 Aligned Residues 87 % Identity 23% Template c2z1dA_ PDB info PDB header:metal binding protein Chain: A: PDB Molecule:hydrogenase expression/formation protein hypd; PDBTitle: crystal structure of [nife] hydrogenase maturation protein, hypd from2 thermococcus kodakaraensis Resolution 2.07 Å

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		9	10	.	.		.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure						.
Query SS confidence						.
Query Sequence		T	D	P	G	.	I	D	D	A	V	A	I	A	A	A	I	F	A	P	E	L	D	L	Q	L	M	T	T	V	A	G	N	V	S	V	E	K	T	T	R	N	A	L	Q	L	L	H	F	W	N	A	E	I	P	L	A	Q	G	A	A	V	P	L	V	R	A	P	R	D	A	A	S	V	H	G	E	S	G	M	A
Query Conservation						.
Alig confidence						.																			.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																									.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	P	V	E	D	I	V	A	M	Q	L	I	M	R	K	A	R	E	E	G	E	E	I	.	.	I	L	T	T	F	G	D	M	Y	K	I	P	T	P	M	G	S	F	A	D	L	K	S	E	G	F	D	V	R	I	V	Y	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		S																		T	T				.	.						T	T	G	G	G				T	T									T	T							S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																									.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.			.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.		.	.	.	.	120	.	.	.	.	.	.	.				.	.	130	.	.	.	.	.
Predicted Secondary structure																														.													.	.	.
Query SS confidence																														.													.	.	.
Query Sequence		G	Y	D	F	V	E	H	N	R	K	P	L	G	I	P	A	F	L	A	I	R	D	A	L	M	R	A	P	.	E	P	V	T	L	V	A	I	G	P	L	T	.	.	.	N	I	A	L	L	L	S	Q
Query Conservation																														.													.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.													.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	F	D	T	Y	R	I	A	K	E	N	P	D	K	T	V	V	H	F	S	P	G	F	E	T	T	T	A	P	A	A	G	M	L	N	V
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												T	T	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions